Jatropha Genome Database

JcCB0836121.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0836121.10 + phase: 1 /partial
         (199 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013950 conserved hypothetical protein                          174   1e-43

>30147.m013950 conserved hypothetical protein
          Length = 1608

 Score =  174 bits (88), Expect = 1e-43
 Identities = 165/188 (87%), Gaps = 2/188 (1%)
 Strand = Plus / Plus

                                                                       
Query: 12  gcacaaccaacaaatgagattcagcagccagccagggaggaggctactaaacagagtccc 71
           |||||||||||||||||||||||||| | ||||||||||||||  |||||||| ||||| 
Sbjct: 73  gcacaaccaacaaatgagattcagcaacaagccagggaggaggtcactaaacaaagtcca 132

                                                                       
Query: 72  ccatctgtctttgtgaactcggaaccaatgcgagaggatcaagtgcagaatgctgtaaaa 131
           ||||| |||||||| ||||| || || ||| |||| ||||||||||||||||||||  ||
Sbjct: 133 ccatcggtctttgtcaactcagagcctatgagagaagatcaagtgcagaatgctgt-taa 191

                                                                       
Query: 132 atttctttcacacccaaaaagttaggggttctccggccatgtataggcgatcctttcttg 191
           ||||||||| ||||| ||||||||||||||| || | |||||||||||| || |||||||
Sbjct: 192 atttctttcgcaccc-aaaagttaggggttcccctgtcatgtataggcggtcttttcttg 250

                   
Query: 192 aaaggaag 199
           | ||||||
Sbjct: 251 agaggaag 258