Jatropha Genome Database

JcCB0828941.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0828941.10 + phase: 0 /partial
         (348 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29583.m000187 conserved hypothetical protein                          309   6e-84

>29583.m000187 conserved hypothetical protein
          Length = 732

 Score =  309 bits (156), Expect = 6e-84
 Identities = 234/260 (90%)
 Strand = Plus / Plus

                                                                       
Query: 7   ctcattgatgaacttggtgctgaagccatgatgatggatgctttggagaaagttgaaaag 66
           |||| |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| 
Sbjct: 406 ctcactgatgagcttggtgcagaagctatgatgatggatgctttggagaaagttgaaaat 465

                                                                       
Query: 67  gaaatcaagaaacctctaatgaggaatgataagaaaggaatggctcttctattgacagaa 126
           ||| ||||||||||||| |||||||||||||||||||||||||||||||||  | |||| 
Sbjct: 466 gaactcaagaaacctctcatgaggaatgataagaaaggaatggctcttctaacggcagag 525

                                                                       
Query: 127 tttgataacattaacaaaaagcttggaattcggaaggaagatcttcccaagtatgaagaa 186
           || ||||| ||||| || |||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 526 ttcgataaaattaataagaagcttggaattcgcaaggaagatcttccgaagtatgaagaa 585

                                                                       
Query: 187 gagctagaaaacaaaattgccaaagcacaattagaggagctgaaaaaggatgctcttgaa 246
           ||  |||||  ||||||||||||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 586 gatttagaactcaaaattgccaaagcacaattagaggagctgaagaaggatgcacttgag 645

                               
Query: 247 gccatggaaacccaaaagaa 266
           |||||||| || ||||||||
Sbjct: 646 gccatggacactcaaaagaa 665