Jatropha Genome Database
- JcCB0822121.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0822121.10 + phase: 0 /partial
(656 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29908.m006005 DNA binding protein, putative 218 3e-56
28206.m000104 DNA binding protein, putative 125 4e-28
30190.m010825 DNA binding protein, putative 66 3e-10
29900.m001561 Ethylene-responsive transcription factor, putative 56 3e-07
29792.m000600 hypothetical protein 56 3e-07
>29908.m006005 DNA binding protein, putative
Length = 1152
Score = 218 bits (110), Expect = 3e-56
Identities = 182/206 (88%)
Strand = Plus / Plus
Query: 451 aaccaacatggccttaactttttaggtccgaaacccgtgcccatgaagcaggtgggttca 510
|||||| || |||| ||||||||| |||||||||| | || ||||||||||||||||||
Sbjct: 466 aaccaaaatagcctaaactttttaagtccgaaaccaatcccaatgaagcaggtgggttca 525
Query: 511 ccaccaaaacccactaagctctacagaggagtaaggcagcgacattggggcaaatgggtt 570
|||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 526 ccaccaaaacccacaaaactctatagaggagtgaggcagcgacattggggaaaatgggta 585
Query: 571 gccgagatccgactacccaagaaccgtacacgactctggcttggtacttttgacacagca 630
|| |||||| |||| || |||||||||||| ||||||||||||| ||||| ||||| |||
Sbjct: 586 gcagagatcagactgccaaagaaccgtacaagactctggcttgggactttcgacactgca 645
Query: 631 gaagaagccgctttagcttatgacaa 656
|||||||| ||||| |||||||||||
Sbjct: 646 gaagaagctgctttggcttatgacaa 671
Score = 91.7 bits (46), Expect = 5e-18
Identities = 63/68 (92%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 45 tgacctctttggaggtg---agctaatggaagcacttgaaccttttatgaaaagtgctac 101
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |
Sbjct: 54 tgacctctttggaggtggtgagctaatggaagcacttgaaccttttatgagaagtgcttc 113
Query: 102 ttcttcaa 109
||||||||
Sbjct: 114 ttcttcaa 121
>28206.m000104 DNA binding protein, putative
Length = 1125
Score = 125 bits (63), Expect = 4e-28
Identities = 123/143 (86%)
Strand = Plus / Plus
Query: 514 ccaaaacccactaagctctacagaggagtaaggcagcgacattggggcaaatgggttgcc 573
|||||||| || || || || ||||||||||||||| ||||||||||||||||||| ||
Sbjct: 511 ccaaaaccaacaaaactatatagaggagtaaggcagagacattggggcaaatgggtagct 570
Query: 574 gagatccgactacccaagaaccgtacacgactctggcttggtacttttgacacagcagaa 633
||||| |||| || |||||| | ||| |||| |||||||| |||||||||||||| |||
Sbjct: 571 gagattagacttcctaagaacagaacaagactttggcttggcacttttgacacagctgaa 630
Query: 634 gaagccgctttagcttatgacaa 656
||||| ||||| |||||||||||
Sbjct: 631 gaagctgctttggcttatgacaa 653
Score = 60.0 bits (30), Expect = 2e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 71 aagcacttgaaccttttatgaaaagtgctacttc 104
||||||||||||||||||||||||||||| ||||
Sbjct: 86 aagcacttgaaccttttatgaaaagtgcttcttc 119
>30190.m010825 DNA binding protein, putative
Length = 948
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 532 tacagaggagtaaggcagcgacattggggcaaatgggttgc 572
||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 337 tacagaggagtgaggcagagacattggggcaaatgggttgc 377
>29900.m001561 Ethylene-responsive transcription factor, putative
Length = 741
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 607 tggcttggtacttttgacacagcagaagaagccgctttagctta 650
|||||||| |||||||| |||||||||| ||| |||||||||||
Sbjct: 463 tggcttgggacttttgatacagcagaagcagcagctttagctta 506
>29792.m000600 hypothetical protein
Length = 1317
Score = 56.0 bits (28), Expect = 3e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 607 tggcttggtacttttgacacagcagaagaagccgctttagcttatgac 654
|||||||| ||||||||||||||||| ||||| |||| |||||||||
Sbjct: 271 tggcttggcacttttgacacagcagaggaagctgcttgtgcttatgac 318