Jatropha Genome Database
- JcCB0819751.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0819751.10 + phase: 0 /partial
(1459 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30063.m001431 pentatricopeptide repeat-containing protein, putative 375 e-103
40173.m000012 pentatricopeptide repeat-containing protein, putative 270 2e-71
>30063.m001431 pentatricopeptide repeat-containing protein, putative
Length = 1905
Score = 375 bits (189), Expect = e-103
Identities = 333/381 (87%)
Strand = Plus / Plus
Query: 1079 tgatgattatggaaggttgttttccaagtcctggaatttttaattctcttgttcatgctt 1138
||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||
Sbjct: 2 tgatgattacagaaggttgttatccaagtcctatgatatttaattctcttgttcatgctt 61
Query: 1139 actgcagatcaagagactactcttatgcatataagttgctcaagaaaatggtgaaatgtg 1198
||||||||||| |||| |||| |||||| ||||||||||||||||||||||| | |||||
Sbjct: 62 actgcagatcaggagattacttttatgcttataagttgctcaagaaaatggtaatatgtg 121
Query: 1199 ggtgccagccaggttatgtggtttacaatatattgattggtggtatttgtggcaatgaag 1258
||| |||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| |
Sbjct: 122 ggtaccagcctggttatgtggtttacaatatattgattggtggtatttgtagcactgagg 181
Query: 1259 acttgcctagtatggatgttttagagctggctgagacagcctatagtgaaatgcttgagg 1318
| |||||||| ||||| || | | | ||||||||| |||||| | ||||||||||||
Sbjct: 182 atttgcctagcatggaagtgattgggttggctgagagagcctacaatgaaatgcttgaaa 241
Query: 1319 tgggggttgtattgaataaggtcaatgtcagcaattttgcaagatgtctttgtggtgttg 1378
||||||||||||||||||| ||||||||| |||||||| || | ||||| ||| | |||
Sbjct: 242 tgggggttgtattgaataaagtcaatgtctgcaattttacacggtgtctatgttgcattg 301
Query: 1379 gaaaatttgagaaggcatttaatgttattcgtgaaatgatgagtaaaggctttatacctg 1438
| |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| |
Sbjct: 302 ggaaatttgagaaggcatataatgtaattcgtgaaatgatgagtaagggctttatacccg 361
Query: 1439 atattggcacatattccaaag 1459
||| |||||||||||||||
Sbjct: 362 atagcagcacatattccaaag 382
>40173.m000012 pentatricopeptide repeat-containing protein, putative
Length = 793
Score = 270 bits (136), Expect = 2e-71
Identities = 423/518 (81%), Gaps = 3/518 (0%)
Strand = Plus / Plus
Query: 307 attttgaataatgatgatgggtttgggagcaaaacccagaaatttcttagacaatttagg 366
|||||||||||| ||||||| ||||||| ||| |||||||||||||||| |||| |||
Sbjct: 268 attttgaataatcatgatggttttgggatcaatgcccagaaatttcttaggcaatataga 327
Query: 367 gaaaaattgagcgaatctttggtagctgaggttttgaatttagtaaaaaaccctgaattg 426
|||||||| |||| ||||| | ||||||| ||||| | | |||||||| ||||||
Sbjct: 328 ccaaaattgactcaatcattggttgttgaggttctgaatcaaattaaaaaccccgaattg 387
Query: 427 ggtattaagttctttatatgggctggcaggcaaattgggtacagtcacactcaggctgtg 486
|| ||| | || ||| |||||||||| |||||||||||||| ||||||||| | ||
Sbjct: 388 ggcattcatttttttctatgggctggtaggcaaattgggtattgtcacactctcccagtt 447
Query: 487 tataatgcgctgttagaaatgattgagagtactaacaacaatagtaatgatagaatacca 546
|| ||||| |||||||||| ||||| | || || | | || ||||| || |||||
Sbjct: 448 tacaatgcattgttagaaattattgaaactagtactgaaacta---atgatggagtacca 504
Query: 547 gaacaatttttgcgcgaaattaaggatgaggacaaggaagttcttgggaagttgcttaat 606
|||| |||||| ||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 505 caacatcttttgcttcaaattaaggatgacgagaaggaagtgcttgggaagttgcttaat 564
Query: 607 gttttgattcgtaagtattgtcaaaatggtttgtggaatgcagcattggaagaattaggc 666
|||||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 565 gttttgattcgtaagttatgtcaaaatggtttatggaatgctgcattggaagagttaggt 624
Query: 667 agacttaaggattttgggtacaaggcttcaagattaacttataatgctttagttattgtg 726
|| |||||| | |||||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 625 aggcttaagaaccttgggtacaaggcttcaagattaacttataatgcattacttcaagtc 684
Query: 727 tttttaagagctgaaaaattagacacagcttatttggttcatagggagatgtcaaacttg 786
||||||||||||||| | ||||||| ||||||||||| | |||||| ||| |||
Sbjct: 685 tttttaagagctgaacgactagacactgcttatttggtccttagggaaatgctggctttg 744
Query: 787 gggtatagcatggatagctttactttgggttgttttgc 824
|| |||||||||||| ||||||||||| ||||||||
Sbjct: 745 ggatatagcatggatgagtttactttgggctgttttgc 782