Jatropha Genome Database

JcCB0817551.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0817551.10 - phase: 1 /pseudo/partial
         (1007 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28166.m001038 (+)-delta-cadinene synthase isozyme A, putative         182   3e-45

>28166.m001038 (+)-delta-cadinene synthase isozyme A, putative
          Length = 1677

 Score =  182 bits (92), Expect = 3e-45
 Identities = 245/296 (82%)
 Strand = Plus / Plus

                                                                        
Query: 690  tgcagacttatggacgatataacatctcatacgtttgagcaaaaaagagaacatgcggct 749
            ||||||||||||||||| ||   ||| |||  |||||||||||  ||  ||||||  |||
Sbjct: 1354 tgcagacttatggacgacattgtatcccatgagtttgagcaaacgaggaaacatgttgct 1413

                                                                        
Query: 750  tcgggctttgaatgttacataaagcaacatggtggttcaaaggaagaggcagaaaaattg 809
            || ||  |||| || ||||| |||||| |||||| |||| ||||||||| |   ||||||
Sbjct: 1414 tctggtgttgagtgctacattaagcaatatggtgcttcagaggaagaggtaattaaattg 1473

                                                                        
Query: 810  tttcggaaagagattagaaatgcatggaaagacataaatgaggagtgcctaaagccaact 869
            || ||||||||| ||| |||||| ||||||||  | |||||||||||||| || ||||||
Sbjct: 1474 ttccggaaagaggttacaaatgcgtggaaagatttgaatgaggagtgcctcaacccaact 1533

                                                                        
Query: 870  ccagttcctatgcctctgttagagcgagttctgaatcttacgcgcgcaatggatgttata 929
            ||||||||||||||  || ||||||| ||| |||||||||| || ||||| ||||| |||
Sbjct: 1534 ccagttcctatgccgatgctagagcgtgttgtgaatcttacacgggcaattgatgtcata 1593

                                                                    
Query: 930  tacaaagatgaagatggatacactaattctcatgttataaaagattatgttgcttc 985
            ||||||||||| ||||||||||| ||||||||  | || ||||| |||||||||||
Sbjct: 1594 tacaaagatgatgatggatacacaaattctcacatcatgaaagactatgttgcttc 1649



 Score =  149 bits (75), Expect = 4e-35
 Identities = 222/271 (81%)
 Strand = Plus / Plus

                                                                        
Query: 139  caacaaagctgccttatgcaagagatagagtggtggagtgctacttttggatgatgggaa 198
            ||||||| || |||||||| ||||| ||||||||||||||||||||||||||| | ||| 
Sbjct: 797  caacaaaactaccttatgctagagacagagtggtggagtgctacttttggatggttggag 856

                                                                        
Query: 199  tttattttgaacccaaatattcatttggaagaaggatgatgacaaaagtcatagccactt 258
            |||| ||||||||  ||||||| |||| |||||  |||||||||||| | ||||||| | 
Sbjct: 857  tttactttgaacctcaatattcttttgcaagaataatgatgacaaaaataatagccatta 916

                                                                        
Query: 259  tatccctactcgatgatacttatgataactatggtacaggtgcagaactagagatcctta 318
             |||  |  | ||||||||||||||||| |||| ||| |||| |||||| |||||| | |
Sbjct: 917  catcattgttagatgatacttatgataattatgctacgggtgaagaactcgagatcttaa 976

                                                                        
Query: 319  ccgaagccatccagaggtggaatattaaggaaaaggatacacttccagagtacatgaaaa 378
            | ||||| ||  | |||||| | |||||||  || ||| |||||||||||||||||||||
Sbjct: 977  cagaagctatagaaaggtgggacattaaggccaaagatgcacttccagagtacatgaaaa 1036

                                           
Query: 379  ttatttttaatacagtaatagatgtctataa 409
            | ||||  | |||| || ||||| |||||||
Sbjct: 1037 taatttacactacattattagatatctataa 1067