Jatropha Genome Database

JcCB0813641.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0813641.10 + phase: 0 /pseudo/partial
         (498 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30143.m001198 conserved hypothetical protein                          351   3e-96
29973.m000398 hypothetical protein                                     60   1e-08

>30143.m001198 conserved hypothetical protein
          Length = 630

 Score =  351 bits (177), Expect = 3e-96
 Identities = 308/351 (87%), Gaps = 3/351 (0%)
 Strand = Plus / Plus

                                                                       
Query: 151 agttttgcagctactttcagtgagaaggtgacaagaactgtaagaaagttctctccacat 210
           |||||||||||||| |||||||||||||| ||||||||||| |||||| |||||||||||
Sbjct: 277 agttttgcagctaccttcagtgagaaggtaacaagaactgtgagaaaggtctctccacat 336

                                                                       
Query: 211 ttggcagcaaagatgaggcctcctcacatgcctgttattcgtggtcg---atcagctaaa 267
           | |||||||||||||||||| |||||||||||||||||||| |||||   |||||| |||
Sbjct: 337 tgggcagcaaagatgaggccacctcacatgcctgttattcgcggtcgtccatcagccaaa 396

                                                                       
Query: 268 aaatctgtatacatctgtggccaacctcgtggggtgtgtgtgtttttattctcagcagcc 327
           ||||| |||||||||||||||||||| |||||||||| ||| |||||||| ||||| |||
Sbjct: 397 aaatcagtatacatctgtggccaaccccgtggggtgtttgtctttttattttcagctgcc 456

                                                                       
Query: 328 agtattattctgtggttcacttctgggagtctattgtacgtgttatgggcatttggtatc 387
           ||| ||||||||||||| |||||  | ||||| | |   ||||| |||||| |||| || 
Sbjct: 457 agttttattctgtggtttacttccagtagtctgtggactgtgttgtgggcacttggaatt 516

                                                                       
Query: 388 ggcctccttgttactattattcatgcaagtgttaggacacctaatctgaaggcacgccta 447
           ||||||||||||||| || ||||||||||||  || ||||||||||||||||| ||||| 
Sbjct: 517 ggcctccttgttactgttcttcatgcaagtgccagaacacctaatctgaaggcccgcctc 576

                                                              
Query: 448 aatacattccgtgaagaatttcgtgcagtgtggcgcaattatagtgagctt 498
           || |||||||| ||||||||||||  ||||||||||||||| |||||||||
Sbjct: 577 aacacattccgcgaagaatttcgtcaagtgtggcgcaattacagtgagctt 627


>29973.m000398 hypothetical protein
          Length = 1131

 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 154 tttgcagctactttcagtgagaaggtgacaagaactgtaagaaagttctctccacatttg 213
           ||||||| |||||| ||||| |||| |||||||||||| ||  | || ||||||||||| 
Sbjct: 265 tttgcaggtacttttagtgaaaaggcgacaagaactgtgaggcaattttctccacattta 324

                                 
Query: 214 gcagcaaagatgaggcctcctc 235
           || || |||||||| |||||||
Sbjct: 325 gctgctaagatgagacctcctc 346