Jatropha Genome Database
- JcCB0799431.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0799431.10 + phase: 2 /pseudo/partial
(679 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29631.m001013 Polygalacturonase precursor, putative 502 e-141
29848.m004640 polygalacturonase, putative 58 7e-08
>29631.m001013 Polygalacturonase precursor, putative
Length = 1533
Score = 502 bits (253), Expect = e-141
Identities = 427/485 (88%)
Strand = Plus / Plus
Query: 158 cagatagatggaacaatagtggcacctgatgagcctaacaactgggatccaaaatttcca 217
||||||||||| |||||||| ||||||| |||||| | ||||||||||| || |||||
Sbjct: 367 cagatagatgggacaatagtagcacctgctgagcccgagaactgggatccgaaccttcca 426
Query: 218 cgacaatggcttgattttactaaactgcaagcagtgattttccaagggaatggagttatt 277
|| ||||||||||| |||||||| | | ||| | |||||||| ||||||| |||
Sbjct: 427 cgtatctggcttgatttctctaaactgaatggagttctattccaaggacatggagtcatt 486
Query: 278 gatggctcaggcagcaaatggtgggcatcatcttgcaaaaagaacaaatcaaatccttgc 337
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 487 gatggctcgggcagcaaatggtgggcatcatcttgcaaaaagaacaagacaaatccttgc 546
Query: 338 agaggagcaccaacagcattaactattgattcaagctcatctgtgaaggtaagaggcctt 397
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 547 aggggagcaccaacagcattaactatagattcaagctcatctgtgaaggtaagaggcctg 606
Query: 398 accatccaaaatagccaacaaatgaattttgtgatttcccggtctgcatctgtacgagta 457
|| |||||||| |||||||| ||||||||||||||| |||| || |||||||| |||||
Sbjct: 607 actatccaaaacagccaacagatgaattttgtgattgcccgatcagcatctgtccgagtg 666
Query: 458 tcccaagtattagtctcggctcctgaagacagtcctaacactgatggaattcatattact 517
|||| |||| |||| ||| |||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 667 tcccgagtactagtttcgtctccaggagacagtccgaacactgatggaattcatattact 726
Query: 518 ggctcaactaatgttgttcttcaagactgcaaaattggaacaggtgatgactgcatatca 577
| ||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 727 gattcaactaatgttgctcttcaagactgcaaaattggaacaggtgatgattgcgtatca 786
Query: 578 attgtcaatggtagctctgctatcaagatgaagaatatttattgtggaccaggacatgga 637
||||||||||||||||||| ||||| ||||||| || | ||||||||| |||||||||
Sbjct: 787 attgtcaatggtagctctggcatcaaaatgaagagaatcttttgtggacctggacatgga 846
Query: 638 gtcag 642
|||||
Sbjct: 847 gtcag 851
Score = 61.9 bits (31), Expect = 5e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 30 gttcctccaggacgtcgctatttagttaatgcaacaagattta 72
||||| |||||||| |||||||||||||||||||||| |||||
Sbjct: 295 gttcccccaggacgccgctatttagttaatgcaacaaaattta 337
>29848.m004640 polygalacturonase, putative
Length = 1092
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 476 gctcctgaagacagtcctaacactgatggaatt 508
|||||||||||||| ||||||||||||||||||
Sbjct: 547 gctcctgaagacagccctaacactgatggaatt 579