Jatropha Genome Database

JcCB0796091.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0796091.10 + phase: 2 /partial
         (291 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013673 conserved hypothetical protein                          299   5e-81
29589.m001256 conserved hypothetical protein                           74   5e-13

>30170.m013673 conserved hypothetical protein
          Length = 1854

 Score =  299 bits (151), Expect = 5e-81
 Identities = 256/291 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaacatgcatggggtgttcacagaggctagaggaccttttactccatctcagtggatgga 60
           |||||||||||| || |  ||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 426 aaacatgcatggagtttatacagaggctagaggaccatttactccatctcaatggatgga 485

                                                                       
Query: 61  gcttgaacaccaggccttgatctataaatacataaccgccaatgttcctataccttctaa 120
           ||||||||| ||||| |||||||| ||||||||||| || ||||| |||||||| |||||
Sbjct: 486 gcttgaacatcaggcattgatctacaaatacataactgctaatgtccctataccatctaa 545

                                                                       
Query: 121 tctgctaattcccattagaaaagctcttgattctgctgggttctctagcttttcaggtgg 180
           |||||| || ||||| |||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 546 tctgcttatccccataagaaaagctcttgattctgctgggttctctagcttttcgggcgg 605

                                                                       
Query: 181 actcctcagacccaatactttgccatggggtactttccatcttgggttctcgaacaacac 240
            || ||||||||||| || |||||||||||| |||||||||| || ||||| | ||||| 
Sbjct: 606 gcttctcagacccaacacattgccatggggtgctttccatctgggtttctcaagcaacaa 665

                                                              
Query: 241 tgatccagagccaggtcggtgtcgtaggactgatggaaagaaatggcggtg 291
           |||||||||||| || || ||||| ||||| ||||| || |||||||||||
Sbjct: 666 tgatccagagcctgggcgttgtcgcaggacagatgggaaaaaatggcggtg 716


>29589.m001256 conserved hypothetical protein
          Length = 702

 Score = 73.8 bits (37), Expect = 5e-13
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                    
Query: 130 tcccattagaaaagctcttgattctgctgggttctctagcttttcaggtggactcct 186
           |||||| ||||||| |||| |||||||||| ||||||||||||||| ||||||||||
Sbjct: 525 tcccataagaaaaggtcttaattctgctggcttctctagcttttcacgtggactcct 581