Jatropha Genome Database
- JcCB0779901.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0779901.10 - phase: 0 /partial
(344 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29983.m003281 r2r3-myb transcription factor, putative 293 3e-79
29933.m001439 r2r3-myb transcription factor, putative 100 1e-20
28161.m000225 r2r3-myb transcription factor, putative 88 4e-17
29633.m000891 r2r3-myb transcription factor, putative 82 2e-15
30005.m001298 Transcription repressor MYB4, putative 60 9e-09
29908.m006031 r2r3-myb transcription factor, putative 60 9e-09
30027.m000837 r2r3-myb transcription factor, putative 60 9e-09
30225.m001683 r2r3-myb transcription factor, putative 54 6e-07
30147.m013749 r2r3-myb transcription factor, putative 50 9e-06
29929.m004749 r2r3-myb transcription factor, putative 50 9e-06
>29983.m003281 r2r3-myb transcription factor, putative
Length = 1035
Score = 293 bits (148), Expect = 3e-79
Identities = 223/248 (89%)
Strand = Plus / Plus
Query: 1 atgggaagagctccttgctgtgataagaatggtctcaagaaaggtccatggactcctgag 60
||||||||||| ||||||||||| || | ||| |||||||||||||| |||||||| ||
Sbjct: 1 atgggaagagcaccttgctgtgacaaaactggactcaagaaaggtccttggactccagac 60
Query: 61 gaagatcataagctcatttcttacattcaacttcatggacctggcaactggcgtaccctc 120
||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 61 gaagatcataaactcatttcttatattcaccttcatggacccggcaactggcgtaccctc 120
Query: 121 cccaagaatgctgggctccaaagatgtggaaagagctgtcgtcttcgatggacaaactac 180
|| ||||||||||| || ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 cctaagaatgctggtcttcaaagatgtggaaagagctgtcgtcttcgatggacgaactat 180
Query: 181 ctgcgacctgatatcaagagaggaaggttctccttcgaagaagaagagtctattatccaa 240
|| ||||||||||||| ||||||||||||||| || ||||||||||| | ||||||||
Sbjct: 181 ctccgacctgatatcaggagaggaaggttctcttttgaagaagaagaaaccattatccag 240
Query: 241 ctccatag 248
||||||||
Sbjct: 241 ctccatag 248
Score = 63.9 bits (32), Expect = 6e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 297 gtggtcggccatagctgctcgcttgccaggaagaactgataatgaaat 344
||||||||| ||||||||||||||||| || ||||||||||| |||||
Sbjct: 264 gtggtcggctatagctgctcgcttgcctggcagaactgataacgaaat 311
>29933.m001439 r2r3-myb transcription factor, putative
Length = 1029
Score = 99.6 bits (50), Expect = 1e-20
Identities = 152/186 (81%)
Strand = Plus / Plus
Query: 19 tgtgataagaatggtctcaagaaaggtccatggactcctgaggaagatcataagctcatt 78
||||| |||||||| || ||||| || |||||||| ||||| |||||||| ||||| |||
Sbjct: 19 tgtgacaagaatgggctaaagaaggggccatggacacctgaagaagatcagaagctaatt 78
Query: 79 tcttacattcaacttcatggacctggcaactggcgtaccctccccaagaatgctgggctc 138
||| || || ||||| |||||||||| | || || || ||||||||||| ||
Sbjct: 79 gattatatacagaaacatggttatggcaactggagaacacttccaaagaatgctggactg 138
Query: 139 caaagatgtggaaagagctgtcgtcttcgatggacaaactacctgcgacctgatatcaag 198
||||||||||||||||| || |||||||| ||||| ||||| || ||||||||||||||
Sbjct: 139 caaagatgtggaaagagttgccgtcttcgttggactaactatttgagacctgatatcaag 198
Query: 199 agagga 204
||||||
Sbjct: 199 agagga 204
>28161.m000225 r2r3-myb transcription factor, putative
Length = 171
Score = 87.7 bits (44), Expect = 4e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 1 atgggaagagctccttgctgtgataagaatggtctcaagaaaggtccatggactcctgag 60
|||||||| |||||||||||||| ||| ||| ||||||||||||||||||||||||||
Sbjct: 1 atgggaaggtctccttgctgtgatgagagtggcctcaagaaaggtccatggactcctgaa 60
Query: 61 gaagatca 68
||||||||
Sbjct: 61 gaagatca 68
>29633.m000891 r2r3-myb transcription factor, putative
Length = 729
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 13 ccttgctgtgataagaatggtctcaagaaaggtccatggactcctgaggaagatcataag 72
|||||||||||||||| ||||||||||| ||||||||||||| ||| |||||||| |||
Sbjct: 13 ccttgctgtgataagattggtctcaagagaggtccatggactattgaagaagatcacaag 72
Query: 73 ctcat 77
|||||
Sbjct: 73 ctcat 77
>30005.m001298 Transcription repressor MYB4, putative
Length = 909
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 7 agagctccttgctgtgataagaatggtctcaagaaaggtccatggactcctgaggaagat 66
||||||||||||||||| || | || | ||||||||||| ||||||||||||||||||
Sbjct: 7 agagctccttgctgtgagaaaatgggattaaagaaaggtccctggactcctgaggaagat 66
Query: 67 ca 68
||
Sbjct: 67 ca 68
>29908.m006031 r2r3-myb transcription factor, putative
Length = 843
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 11 ctccttgctgtgataagaatggtctcaagaaaggtccatggactcctgaggaagatca 68
|||| ||||||||| ||||||| || |||||||| || ||||||||||| ||||||||
Sbjct: 11 ctccatgctgtgatgagaatggactgaagaaaggaccttggactcctgaagaagatca 68
>30027.m000837 r2r3-myb transcription factor, putative
Length = 267
Score = 60.0 bits (30), Expect = 9e-09
Identities = 150/190 (78%)
Strand = Plus / Plus
Query: 16 tgctgtgataagaatggtctcaagaaaggtccatggactcctgaggaagatcataagctc 75
||||| ||||| ||||| | ||||| |||||||||||| ||||||||||||| ||| |
Sbjct: 16 tgctgcgataaaaatggattaaagaagggtccatggactgctgaggaagatcagaagttg 75
Query: 76 atttcttacattcaacttcatggacctggcaactggcgtaccctccccaagaatgctggg 135
|| ||| ||||| ||||||| ||| ||||| | |||||| |||||||| ||
Sbjct: 76 atcgattatattcagaaacatggacatgggcgatggcggatcctcccaaagaatgcaggt 135
Query: 136 ctccaaagatgtggaaagagctgtcgtcttcgatggacaaactacctgcgacctgatatc 195
|| |||||||||| ||||| ||||||||||| ||||| || ||| | ||||||||||
Sbjct: 136 ctaaaaagatgtgggaagagttgtcgtcttcgctggactaattacttaagacctgatatt 195
Query: 196 aagagaggaa 205
|| |||||||
Sbjct: 196 aaaagaggaa 205
>30225.m001683 r2r3-myb transcription factor, putative
Length = 657
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 11 ctccttgctgtgataagaatggtctcaagaaaggtccatggactcctgaggaaga 65
|||||||||||||||| ||| | ||||||||| |||||||||||||||||||
Sbjct: 11 ctccttgctgtgataaatctggattaaagaaaggtacatggactcctgaggaaga 65
>30147.m013749 r2r3-myb transcription factor, putative
Length = 834
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 143 gatgtggaaagagctgtcgtcttcgatggacaaacta 179
||||||||||||||||| | ||||| |||||||||||
Sbjct: 74 gatgtggaaagagctgtaggcttcggtggacaaacta 110
>29929.m004749 r2r3-myb transcription factor, putative
Length = 441
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 37 aagaaaggtccatggactcctgaggaagatcataagctcat 77
|||| ||||||||||||| ||| |||||||||||||||||
Sbjct: 37 aagagaggtccatggactattgaagaagatcataagctcat 77