Jatropha Genome Database

JcCB0779721.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0779721.10 - phase: 0 
         (279 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014530 WD-repeat protein, putative                             170   3e-42

>30147.m014530 WD-repeat protein, putative
          Length = 1416

 Score =  170 bits (86), Expect = 3e-42
 Identities = 176/206 (85%)
 Strand = Plus / Plus

                                                                       
Query: 9   gggaagagaggcgctggtggcgtgcagtgatagaagtatggggactggaataacagtatg 68
           ||||||||||||  | ||||  ||||||||||| ||||||||||| |||||| || | ||
Sbjct: 9   gggaagagaggcattagtgggatgcagtgataggagtatggggacaggaatatcaatttg 68

                                                                       
Query: 69  ggatttagaaactggagatcgtctcatgcatataccaacctgtgcatcacctgctcatgg 128
           |||  | |||||||||||||| || |||||||| ||||| ||||| ||  || |||||||
Sbjct: 69  ggacgtcgaaactggagatcggcttatgcatattccaacatgtgcttctgctcctcatgg 128

                                                                       
Query: 129 attattgtgcttgagagaccagtttcttgtagcttctcaagttaacaagcatggatctgt 188
            ||||||||| ||| |||||| || |||||||||||||| ||||| ||||||||||||||
Sbjct: 129 tttattgtgcctgaaagaccaattccttgtagcttctcaggttaataagcatggatctgt 188

                                     
Query: 189 tggtggcggggctatcttcatctggc 214
            ||||||||||||||||||| |||||
Sbjct: 189 aggtggcggggctatcttcacctggc 214