Jatropha Genome Database

JcCB0778081.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0778081.10 - phase: 0 /partial
         (222 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30078.m002318 isocitrate dehydrogenase, putative                      165   1e-40

>30078.m002318 isocitrate dehydrogenase, putative
          Length = 1095

 Score =  165 bits (83), Expect = 1e-40
 Identities = 161/187 (86%)
 Strand = Plus / Plus

                                                                        
Query: 32   agaatatggcaaatcccactgccttactgttaagtgctgtcactatgttgcgccatttag 91
            ||||| |||| |||||||| |||||  |||||||| | ||||| ||||||||||||||||
Sbjct: 902  agaatttggcgaatcccacagccttgatgttaagttccgtcaccatgttgcgccatttag 961

                                                                        
Query: 92   agctccatgacaaggctgacaggattcagaatgctatccttaaaacaattgctgagggga 151
            |||||||||||||||| || ||||| |||| |||||||||  | |||||| ||||||| |
Sbjct: 962  agctccatgacaaggcggataggatccagagtgctatcctcgacacaatttctgagggaa 1021

                                                                        
Query: 152  agtatagaactgccgaccttggtggcaaatcttctacaactgattttacgaaggcaatat 211
            ||||  ||||||| |||||||| ||||  || ||||||||||||||||| || |||||||
Sbjct: 1022 agtaccgaactgcggaccttggcggcagttcatctacaactgattttacaaaagcaatat 1081

                   
Query: 212  gtgatca 218
            |||||||
Sbjct: 1082 gtgatca 1088