Jatropha Genome Database

JcCB0768001.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0768001.10 - phase: 0 
         (201 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008623 Zeta-carotene desaturase, chloroplast precursor, p...    84   4e-16

>30128.m008623 Zeta-carotene desaturase, chloroplast precursor,
           putative
          Length = 2895

 Score = 83.8 bits (42), Expect = 4e-16
 Identities = 149/184 (80%), Gaps = 3/184 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttcttcaattctttttccgacaaattctattactggaactcgaagcaagaatcct 60
           |||||||| || |||||| ||||| | |||||| || |||||||| |||| | || ||| 
Sbjct: 4   atggcttcatcgattcttcttccggccaattctgttgctggaactagaaggaggactcca 63

                                                                       
Query: 61  gggttcttgccctcttgtggtcgacg---gtcggtggctcaggtggtgagaacgcaaagg 117
           || |||||||  ||| ||| ||| ||   ||||  ||||||||||||||| || || |||
Sbjct: 64  ggattcttgctttctggtgatcgccgctcgtcgacggctcaggtggtgaggactcagagg 123

                                                                       
Query: 118 ctgtcatttgttcggtctgctttggactctttggagaccaaagtgtctgatatgagtgtt 177
            |||  |||||||| ||||||||||| ||  |||| || |||||||||||||||||||||
Sbjct: 124 ttgttctttgttcgctctgctttggattccctggaaacaaaagtgtctgatatgagtgtt 183

               
Query: 178 aatg 181
           ||||
Sbjct: 184 aatg 187