Jatropha Genome Database

JcCB0765881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0765881.10 - phase: 2 /pseudo/partial
         (350 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30027.m000845 Ubiquitin carboxyl-terminal hydrolase, putative         262   1e-69

>30027.m000845 Ubiquitin carboxyl-terminal hydrolase, putative
          Length = 2376

 Score =  262 bits (132), Expect = 1e-69
 Identities = 165/176 (93%)
 Strand = Plus / Plus

                                                                       
Query: 75  agactgaaatgacaactgctgaaagggaacttgaccaaaatttcaactttgattggaacc 134
           ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 812 agactgaaatgacaactgctgaaagagaacttgaccagaatttcaactttgattggaacc 871

                                                                       
Query: 135 gtatccaagaaagtggagaggaattggaaccaatttttggaccaggttatacaggactag 194
           | || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||  
Sbjct: 872 gaattcaagaaagtggacaggaattggaaccaatttttggaccaggttacacaggacttc 931

                                                                   
Query: 195 tgaatcttggtaacagttgctacatggcagcaacaatgcaagttgtgttctcaaca 250
            ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 932 ggaatcttggcaacagttgctacatggcagcaacaatgcaagttgtattctcaaca 987