Jatropha Genome Database

JcCB0763251.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0763251.10 + phase: 0 /partial
         (613 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004547 ornithine decarboxylase, putative                       178   3e-44

>29929.m004547 ornithine decarboxylase, putative
          Length = 612

 Score =  178 bits (90), Expect = 3e-44
 Identities = 276/338 (81%)
 Strand = Plus / Plus

                                                                       
Query: 133 atttctgataatcaggaagaagctgaacccttttatcttattgatttaggggttgttata 192
           |||||||| ||||| ||||| || |||||||||||| || | ||| |||||||||| |||
Sbjct: 136 atttctgagaatcaagaagaggcggaacccttttatattctcgatataggggttgtcata 195

                                                                       
Query: 193 agactaatggataaatggaatcaatctctgccaaatgtaaaacctttttatgccgttaaa 252
           || ||  |||| ||||||| |||    || ||  |||| ||||| |||||||| || |||
Sbjct: 196 agcctcgtggagaaatggagtcatcacctaccccatgttaaacccttttatgctgtcaaa 255

                                                                       
Query: 253 tgcaatactgagcctgcattacttctatcacttgcaacactcggtgcaaactttgactgt 312
            |||||| |||| ||||||| ||| |    ||||||||||| ||||||||||||||||||
Sbjct: 256 cgcaataatgagtctgcattgcttattgttcttgcaacacttggtgcaaactttgactgt 315

                                                                       
Query: 313 gcaagtcaagctgagattgaaaccatccttggccttggtgttaatcctgacaggattatg 372
           || ||||| |||||||||||  | ||  | ||||||||| ||| |||||| |||||| | 
Sbjct: 316 gctagtcaggctgagattgaggcaattttgggccttggtattagtcctgataggattctt 375

                                                                       
Query: 373 tatgccaatccatgcaagtctgtgtcccatataaaatatgcagctagggttggagtcaac 432
           ||||||||||||||||||  ||| |||||||| || || ||||| || || |||||  ||
Sbjct: 376 tatgccaatccatgcaagagtgtctcccatatcaagtacgcagccagagtcggagtatac 435

                                                 
Query: 433 ctgacaacctttgattccaagcaagaagttgataagat 470
           |||||||| |||||||||||| |||||||||| |||||
Sbjct: 436 ctgacaacttttgattccaaggaagaagttgacaagat 473