Jatropha Genome Database

JcCB0762681.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0762681.10 + phase: 0 /partial
         (321 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30205.m001606 chaperonin containing t-complex protein 1, zeta su...   295   8e-80

>30205.m001606 chaperonin containing t-complex protein 1, zeta
            subunit, tcpz, putative
          Length = 1608

 Score =  295 bits (149), Expect = 8e-80
 Identities = 257/293 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggagcaggagcatttgaatttgctgccaggaaatacctcatcaatgaagtaaagaaaaca 60
            ||||||||||| |||||||| || ||||| || ||| | |||| ||||||||||||||||
Sbjct: 1237 ggagcaggagcttttgaattagcagccagaaagtacttaatcagtgaagtaaagaaaaca 1296

                                                                        
Query: 61   gtgaaagggcgtgctcagcttggtgttgaagcttttgctgatgcccttcttgtggtgccc 120
            || |||||||| |||||| | ||| ||||||||||||| ||||||||||||||  | |||
Sbjct: 1297 gttaaagggcgggctcagttaggtattgaagcttttgcggatgcccttcttgttattccc 1356

                                                                        
Query: 121  aaaacactggctgagaattctgggcttgatactcaagatgagattgttgctcttacagga 180
            ||||| ||||||||||||||||| ||||| |||||||||||||||||| ||||||| || 
Sbjct: 1357 aaaactctggctgagaattctggacttgacactcaagatgagattgtttctcttacgggt 1416

                                                                        
Query: 181  gagcatgacagggataatattgttggaataaacctgcaaacagggggagctcttgacccc 240
            |||||||||||||| |||||||| ||| |||||||||||||||| ||  | |||||||| 
Sbjct: 1417 gagcatgacagggaaaatattgtgggattaaacctgcaaacaggagggccccttgaccct 1476

                                                                 
Query: 241  caaatggagggcatctttgacaactactctgtcaagcgccaaatcataaactc 293
            |||||||| |||||||||||||| |||||||| || |||||| ||||||||||
Sbjct: 1477 caaatggaaggcatctttgacaattactctgttaaacgccaactcataaactc 1529