Jatropha Genome Database

JcCB0762541.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0762541.10 + phase: 2 /partial
         (209 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29784.m000370 Arginine/serine-rich-splicing factor, putative          244   2e-64

>29784.m000370 Arginine/serine-rich-splicing factor, putative
          Length = 747

 Score =  244 bits (123), Expect = 2e-64
 Identities = 182/199 (91%), Gaps = 2/199 (1%)
 Strand = Plus / Plus

                                                                       
Query: 12  taaatcctggaaacacactgtatgtcactggtctatctacaagggtcacagaaag-ggac 70
           ||||||||||||||||||| ||||| |||||||| |||||||| || ||||| || ||||
Sbjct: 209 taaatcctggaaacacactttatgtgactggtctgtctacaagagtaacagagagaggac 268

                                                                       
Query: 71  ttagaagaacatttctctaaggagggaaaggttgcttcatgctttcttgttgtggagccc 130
           | ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 269 t-agaagaacatttcgctaaggagggaaaggttgcttcatgttttcttgttgtggagccc 327

                                                                       
Query: 131 cgcacacgcatttctcgtggttttgcttttgttacgatggacaacgttgaggctgcaaac 190
           || || |||||||||||||||||||||||||||||||||||||| ||||||| ||| || 
Sbjct: 328 cgtactcgcatttctcgtggttttgcttttgttacgatggacaatgttgaggatgccaat 387

                              
Query: 191 cgttgtgttaagcatctca 209
           |||||||||||| ||||||
Sbjct: 388 cgttgtgttaagtatctca 406