Jatropha Genome Database

JcCB0760911.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0760911.10 - phase: 0 /partial
         (204 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29593.m000174 conserved hypothetical protein                          115   1e-25

>29593.m000174 conserved hypothetical protein
          Length = 1503

 Score =  115 bits (58), Expect = 1e-25
 Identities = 114/133 (85%), Gaps = 6/133 (4%)
 Strand = Plus / Plus

                                                                        
Query: 7    atgaagactggtgaatgcaagtttggagaaaggtgcaagttccatcaccctattaatcgt 66
            |||||||||||||| ||||| ||||| ||||| || | |||||||||||||||| |||| 
Sbjct: 1201 atgaagactggtgagtgcaaatttggggaaagatgtaggttccatcaccctattgatcgg 1260

                                                                        
Query: 67   tctgcaccaac------acaagctgaacaacaggctgttaagctcactcttgcaggatta 120
            || ||||||||      ||||||  ||||||||||||||||||||||||||||||| |||
Sbjct: 1261 tcagcaccaactgcaacacaagcccaacaacaggctgttaagctcactcttgcagggtta 1320

                         
Query: 121  cctaggcgagagg 133
            |||||| ||||||
Sbjct: 1321 cctaggagagagg 1333