Jatropha Genome Database

JcCB0757411.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0757411.10 + phase: 1 /pseudo/partial
         (411 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27798.m000581 conserved hypothetical protein                          208   2e-53

>27798.m000581 conserved hypothetical protein
          Length = 2607

 Score =  208 bits (105), Expect = 2e-53
 Identities = 280/337 (83%), Gaps = 1/337 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    ttggaaccaataatactgagaatggaacaaatactgggagacgacttctagaagatgata 60
            |||||||||||| ||||||||| |||||||| |||||||||||||| || |||||||| |
Sbjct: 860  ttggaaccaatactactgagaagggaacaaaaactgggagacgactcctggaagatgaca 919

                                                                        
Query: 61   actccaaggagtctcaggaaagtagttcagattccaaagagaataacaatgaggatgatc 120
            |  ||||||| || |||||| ||||||  || ||   |||||| |||| |||| ||| ||
Sbjct: 920  agaccaaggattcccaggaaggtagtttggagtcgggagagaacaacagtgagaatgttc 979

                                                                        
Query: 121  atgcggcaactgtgga-aatgatgaaggtttggatgcagatgcggatacctcttttgagt 179
            |||  ||||||||||| ||||||||||| ||||| |||||||| ||  | ||||||||||
Sbjct: 980  atgaagcaactgtggagaatgatgaagggttggaagcagatgcagactcttcttttgagt 1039

                                                                        
Query: 180  tattccgtgataatgaggagctgggtgatgaatatagttatgactatgatgattatgtcg 239
            ||||||||||||  || ||  ||| |||||| ||||||||||| |||||||||||||| |
Sbjct: 1040 tattccgtgataccgatgaattggctgatgagtatagttatgattatgatgattatgttg 1099

                                                                        
Query: 240  atgaatccttgtggggaggagaggagtggactgaagaacaacatgagaaatcggaggatt 299
            ||||  || |||||||||  ||||||||||| || ||  | |||||||||| ||||||||
Sbjct: 1100 atgataccatgtggggagatgaggagtggaccgaggagaagcatgagaaattggaggatt 1159

                                                 
Query: 300  atgtgaacatagattcgcacatcctgtgcacccctgt 336
            |||| || || ||||| || ||| ||||||| |||||
Sbjct: 1160 atgtcaatattgattcacatatcttgtgcactcctgt 1196