Jatropha Genome Database

JcCB0746061.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0746061.10 + phase: 0 /partial
         (524 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29827.m002661 9-cis-epoxycarotenoid dioxygenase, putative             357   4e-98

>29827.m002661 9-cis-epoxycarotenoid dioxygenase, putative
          Length = 1857

 Score =  357 bits (180), Expect = 4e-98
 Identities = 435/516 (84%), Gaps = 3/516 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgtgcctatattttctaatggttcgtcccgtctttcctccacgactttggaatcagcaa 60
            ||||||| |||||||| | ||||||| ||| ||||| || || ||||||| |||||||||
Sbjct: 1049 atgtgcccatattttcca-tggttcg-cccatcttttcttcatgactttgcaatcagcaa 1106

                                                                        
Query: 61   aaa-tatgcagtatttgctgacatacaaataggaatgaacccagtggagatgatattcgg 119
             || |||||  ||||||||||||||||||| |  ||||||||  |||| |||||||| ||
Sbjct: 1107 gaagtatgctatatttgctgacatacaaattgttatgaaccccatggacatgatatttgg 1166

                                                                        
Query: 120  aggaggctctccggtgggattggaccctacaaaagtaccgagaatcggaatcattcctcg 179
            |||||||||||| || ||   |||||| ||||||||||| ||  | |||||||| |||||
Sbjct: 1167 aggaggctctcctgtaggtgcggacccaacaaaagtaccaaggcttggaatcatccctcg 1226

                                                                        
Query: 180  ctatgcaaaagacgagtcagaaatgagatggttcgatgtgcctggctttaatctgataca 239
             |||||||| || || ||||||||||| |||||||||||||| || || ||||| || ||
Sbjct: 1227 atatgcaaaggatgaatcagaaatgaggtggttcgatgtgccaggattcaatctaattca 1286

                                                                        
Query: 240  cgcaattaacgcatgggatgaagaagacgcagttgtaatattagcaccaaacatattatc 299
             ||||| |||||||||||||| || |||||| | || || || |||||||| ||||||||
Sbjct: 1287 tgcaatcaacgcatgggatgaggaggacgcaatagtcatgttggcaccaaatatattatc 1346

                                                                        
Query: 300  agcagaacatacgcttgaaagaatggaacttgtccatgctttggtagagaaagtcagaat 359
             | |||||| || ||||| |||||||| ||||||||||| ||||| |||||||| |||||
Sbjct: 1347 cgtagaacacacccttgagagaatggagcttgtccatgccttggtggagaaagtgagaat 1406

                                                                        
Query: 360  agacttaaaaactggcatagtaacaagaaatccagtttcagctagaaatcttgattttgc 419
            |||||||||||| ||||||||||||||||| || |||||||| |||||||| ||||||||
Sbjct: 1407 agacttaaaaacaggcatagtaacaagaaaccctgtttcagcaagaaatctagattttgc 1466

                                                                        
Query: 420  ggtgataaatccagcttatgtggggaagaagaacaaatatgtatacgcagcgataggtga 479
             |||||||| || |||||  | ||||| ||||||| ||||||||| ||||| ||||||||
Sbjct: 1467 agtgataaaccctgcttacattgggaaaaagaacagatatgtatatgcagccataggtga 1526

                                                
Query: 480  tccaatgccaaaaataacaggggtggtcaaattgga 515
             |||||||| || ||| |||||||||| ||| ||||
Sbjct: 1527 cccaatgcctaagatatcaggggtggtgaaactgga 1562