Jatropha Genome Database

JcCB0740621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0740621.10 - phase: 0 
         (249 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28962.m000460 rac gtpase, putative                                    250   3e-66
29602.m000209 rac gtpase, putative                                     80   7e-15
29709.m001184 rac gtpase, putative                                     52   2e-06

>28962.m000460 rac gtpase, putative
          Length = 594

 Score =  250 bits (126), Expect = 3e-66
 Identities = 201/226 (88%)
 Strand = Plus / Plus

                                                                       
Query: 24  ggatgataaacagttctttatagaccatcctggtgctgtacccattactgcagttcaggg 83
           |||||| || || |||||| ||||||| ||||||||||| || |||||| ||| ||||||
Sbjct: 369 ggatgacaagcaattctttgtagaccaccctggtgctgtgcctattactacagctcaggg 428

                                                                       
Query: 84  agaggaactgaggaagctgattaatgcacctgcttatatcgaatgcagttcgaaaacaca 143
           ||||||||||||||||||||||  ||| |||||||| || ||||||||||| ||||||||
Sbjct: 429 agaggaactgaggaagctgattggtgcgcctgcttacattgaatgcagttctaaaacaca 488

                                                                       
Query: 144 gcagaatgtgaagggagttttcgatgcagctatcagagttgtccttcaaccgcccaagca 203
           |||||||||||||| ||| ||||||  ||| |||||||||||||| ||||| ||||||||
Sbjct: 489 gcagaatgtgaaggcagtcttcgatcaagcaatcagagttgtcctccaaccacccaagca 548

                                                         
Query: 204 gaagaaaaagaagaataaagcgcaaaaggcctgttccatattgtga 249
           ||||||||||||||  |||||||||||||| |||||||||||||||
Sbjct: 549 gaagaaaaagaagagcaaagcgcaaaaggcgtgttccatattgtga 594


>29602.m000209 rac gtpase, putative
          Length = 597

 Score = 79.8 bits (40), Expect = 7e-15
 Identities = 106/128 (82%)
 Strand = Plus / Plus

                                                                       
Query: 25  gatgataaacagttctttatagaccatcctggtgctgtacccattactgcagttcaggga 84
           |||||||| || ||| |||||||||| |||||||| || ||||||||  ||| |||||| 
Sbjct: 370 gatgataagcaattccttatagaccaccctggtgcagtgcccattaccacagctcagggg 429

                                                                       
Query: 85  gaggaactgaggaagctgattaatgcacctgcttatatcgaatgcagttcgaaaacacag 144
           || |||||||||||||| |||   || |||| ||| || ||||| ||||| ||||| |||
Sbjct: 430 gaagaactgaggaagctaattggggctcctgtttacattgaatgtagttcaaaaactcag 489

                   
Query: 145 cagaatgt 152
           ||||||||
Sbjct: 490 cagaatgt 497


>29709.m001184 rac gtpase, putative
          Length = 609

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 124 gaatgcagttcgaaaacacagcagaatgtgaagg 157
           |||||||| || ||||||||||||||||||||||
Sbjct: 487 gaatgcagctctaaaacacagcagaatgtgaagg 520