Jatropha Genome Database
- JcCB0736301.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0736301.10 - phase: 0 /partial
(714 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30068.m002588 conserved hypothetical protein 333 9e-91
29700.m000761 conserved hypothetical protein 74 1e-12
30190.m011066 conserved hypothetical protein 64 1e-09
27496.m000094 conserved hypothetical protein 58 8e-08
29706.m001283 conserved hypothetical protein 58 8e-08
30174.m008910 conserved hypothetical protein 58 8e-08
29739.m003775 conserved hypothetical protein 56 3e-07
>30068.m002588 conserved hypothetical protein
Length = 1524
Score = 333 bits (168), Expect = 9e-91
Identities = 326/378 (86%), Gaps = 3/378 (0%)
Strand = Plus / Plus
Query: 3 aggagaaatgaatccgtcgtctatgaatgtggctgtccctttcacagcagctcagtggca 62
||||||||||| || || ||||||||| ||| |||||||||||||| ||||||| |||
Sbjct: 348 aggagaaatgacaccatcatctatgaatatgggagtccctttcacagctgctcagttgca 407
Query: 63 agaactggagaggcagactatgatttacaagtacatgatggcctctgttcctatccctcc 122
||||||||| || ||||| || ||||||||| | |||||||| ||| ||||| |||||||
Sbjct: 408 agaactggaaagacagaccataatttacaagcatatgatggcttctattcctgtccctcc 467
Query: 123 agagttacttattcccatcactaaaactcaatcaaaccctccttcctcacaatcccacgc 182
|| ||||||| |||||||||||||||||||||||| | || | |||||| ||| |
Sbjct: 468 tgaactacttatacccatcactaaaactcaatcaaacgcctctccgacacaattccatgt 527
Query: 183 tttaaaaggttcattagagttggggatttcgggctg---caactcggatccagagccatg 239
| |||||||||||||||| |||||||||| |||| ||||||||||| ||||||||
Sbjct: 528 tgtaaaaggttcattagaaatggggatttcaagctgtacaaactcggatccggagccatg 587
Query: 240 gagatgcaaaagaacagatgggaagaaatggaggtgctcaagggatgtggcacctgacca 299
||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 588 gagatgcaaaagaacagatggaaagaaatggagatgctcaagagatgtggcacctgacca 647
Query: 300 gaagtactgtgaaaggcactctcacaagagccgtccccgttcaagaaagcctgtggaatt 359
|||||| ||||| || || |||||||||||||| || |||||||||||||||||||||||
Sbjct: 648 gaagtattgtgagagacattctcacaagagccgccctcgttcaagaaagcctgtggaatt 707
Query: 360 acacaccgactccatggc 377
||| || |||||||||||
Sbjct: 708 acatactgactccatggc 725
Score = 95.6 bits (48), Expect = 3e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 644 cattgcaagcccatcgcctaaatgaaaattgcagcttgttattaagccccaaatcgacaa 703
|||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 cattgcaagctcatcgcttgaatgaaaattgcagcttgttattaagccccaaatcgacaa 1105
Score = 83.8 bits (42), Expect = 1e-15
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 476 atcagtccaggaacttggaatggttcttgaaaggcgagacagttcctgttgctagcaact 535
||||| ||||| |||||||||||||||||| |||||||||| ||||||| |||| || |
Sbjct: 863 atcagcccaggggcttggaatggttcttgaagggcgagacagctcctgttcctagtaatt 922
Query: 536 ccaaccaagaatggcgttatctgaag 561
|| | |||||||||| ||||||||||
Sbjct: 923 ccgatcaagaatggcattatctgaag 948
>29700.m000761 conserved hypothetical protein
Length = 1440
Score = 73.8 bits (37), Expect = 1e-12
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 253 acagatgggaagaaatggaggtgctcaagggatgtggcacctgaccagaagtactgtgaa 312
|||||||| |||||||||||||| ||||| |||| || ||||| ||||| ||||||||
Sbjct: 457 acagatggaaagaaatggaggtgttcaagagatgctgctcctgatcagaaatactgtgag 516
Query: 313 aggcactctcacaagagccgtccccgttcaagaaagcctgtggaa 357
| ||| |||| |||||||||||||||||||||||||||||
Sbjct: 517 cgtcacatgcacagaggccgtccccgttcaagaaagcctgtggaa 561
Score = 52.0 bits (26), Expect = 5e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 82 atgatttacaagtacatgatggcctctgttcctatccctcca 123
||||| ||||||||||||||||| ||||||||| | ||||||
Sbjct: 280 atgatatacaagtacatgatggcttctgttcctgtgcctcca 321
>30190.m011066 conserved hypothetical protein
Length = 702
Score = 63.9 bits (32), Expect = 1e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 229 ccagagccatggagatgcaaaagaacagatgggaagaaatggaggtgc 276
||||||||| | ||||| | ||||||||||||||||||||||||||||
Sbjct: 421 ccagagccaggaagatgtagaagaacagatgggaagaaatggaggtgc 468
>27496.m000094 conserved hypothetical protein
Length = 1287
Score = 58.0 bits (29), Expect = 8e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 256 gatgggaagaaatggaggtgctcaaggga 284
|||||||||||||||||||||||||||||
Sbjct: 526 gatgggaagaaatggaggtgctcaaggga 554
>29706.m001283 conserved hypothetical protein
Length = 1023
Score = 58.0 bits (29), Expect = 8e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 244 tgcaaaagaacagatgggaagaaatggaggtgctcaa 280
|||| |||||||||||| |||||||||||||||||||
Sbjct: 247 tgcagaagaacagatggaaagaaatggaggtgctcaa 283
>30174.m008910 conserved hypothetical protein
Length = 1311
Score = 58.0 bits (29), Expect = 8e-08
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 249 aagaacagatgggaagaaatggaggtgctcaagggatgtggcacctgaccagaagtactg 308
|||||| |||||||||||||||||||| || | ||||| ||| |||||||||||
Sbjct: 336 aagaactgatgggaagaaatggaggtgtaaaaagattgtggttactggtcagaagtactg 395
Query: 309 tgaaaggcactctcacaagagccgtccccgttcaagaaagcctgtggaa 357
|||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct: 396 tgaacggcacatgcacagaggccgtcaccgttcaagaaagcctgtggaa 444
>29739.m003775 conserved hypothetical protein
Length = 762
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 249 aagaacagatgggaagaaatggaggtgctcaa 280
|||||||||||| |||||||||||||||||||
Sbjct: 252 aagaacagatggaaagaaatggaggtgctcaa 283