Jatropha Genome Database
- JcCB0733091.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0733091.10 - phase: 2 /partial
(223 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30064.m000481 gaba(A) receptor-associated protein, putative 281 8e-76
30064.m000482 gaba(A) receptor-associated protein, putative 240 3e-63
29636.m000773 gaba(A) receptor-associated protein, putative 54 3e-07
29842.m003584 gaba(A) receptor-associated protein, putative 54 3e-07
>30064.m000481 gaba(A) receptor-associated protein, putative
Length = 363
Score = 281 bits (142), Expect = 8e-76
Identities = 184/198 (92%)
Strand = Plus / Plus
Query: 8 gttccagctgatctgactgttggccagtttgtttatgtggttcgaaagagaataaagctc 67
||||| |||||||||||||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 154 gttcctgctgatctgactgttggccaatttgtttatgtggttcggaagagaattaagctc 213
Query: 68 agcgctgagaaggctatattcatctttgtcaggaatgttttgccacccaccgctgccatg 127
|| |||||||||||||||||||||||||||| |||| ||||||||||||| ||||| |||
Sbjct: 214 agtgctgagaaggctatattcatctttgtcaagaatattttgccacccactgctgctatg 273
Query: 128 atgtcagcaatttatgaagaaaacaaagatgaggatggtttcctgtatatgacctatagc 187
||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 274 atgtctgcaatttatgaggaaaacaaagatgaggatggcttcctttatatgacctatagt 333
Query: 188 ggcgagaacacatttgga 205
||||||||||||||||||
Sbjct: 334 ggcgagaacacatttgga 351
>30064.m000482 gaba(A) receptor-associated protein, putative
Length = 378
Score = 240 bits (121), Expect = 3e-63
Identities = 184/205 (89%)
Strand = Plus / Plus
Query: 1 ataccttgttccagctgatctgactgttggccagtttgtttatgtggttcgaaagagaat 60
|||||| |||||||||||||||||||| |||||||||||||| |||||||| || |||||
Sbjct: 147 atacctggttccagctgatctgactgtcggccagtttgtttacgtggttcggaaaagaat 206
Query: 61 aaagctcagcgctgagaaggctatattcatctttgtcaggaatgttttgccacccaccgc 120
|||||| || |||||||||||||||||||||||||||| ||| | ||||| ||||| ||
Sbjct: 207 aaagctgagtgctgagaaggctatattcatctttgtcaagaacatattgcctcccactgc 266
Query: 121 tgccatgatgtcagcaatttatgaagaaaacaaagatgaggatggtttcctgtatatgac 180
||||||||||||||| |||||||| |||||||||||||||||||| ||| |||| |||||
Sbjct: 267 tgccatgatgtcagcgatttatgaggaaaacaaagatgaggatggcttcttgtacatgac 326
Query: 181 ctatagcggcgagaacacatttgga 205
||||| || |||||||||||||||
Sbjct: 327 atatagtggtgagaacacatttgga 351
>29636.m000773 gaba(A) receptor-associated protein, putative
Length = 369
Score = 54.0 bits (27), Expect = 3e-07
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 128 atgtcagcaatttatgaagaaaacaaagatgaggatggtttcctgtatatgacctatagc 187
||||| || ||||||||||| || || ||||| ||||| || || ||| | ||||| |||
Sbjct: 274 atgtctgctatttatgaagagaagaaggatgaagatggatttctctatgttacctacagc 333
Query: 188 ggcgagaacacatttggat 206
|| ||||||||||||||||
Sbjct: 334 ggagagaacacatttggat 352
>29842.m003584 gaba(A) receptor-associated protein, putative
Length = 363
Score = 54.0 bits (27), Expect = 3e-07
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 5 cttgttccagctgatctgactgttggccagtttgtttatgtggttcgaaagagaataaag 64
||||| ||||||||| ||||||| || |||||||| ||||| || || || || || |||
Sbjct: 151 cttgtgccagctgatttgactgtggggcagtttgtgtatgttgtccggaaaaggattaag 210
Query: 65 ctcagcgctgagaaggctatatt 87
|| | |||||||||||||||||
Sbjct: 211 cttggtgctgagaaggctatatt 233