Jatropha Genome Database

JcCB0704851.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0704851.10 + phase: 0 
         (237 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014183 ER lumen protein retaining receptor, putative           139   8e-33

>30170.m014183 ER lumen protein retaining receptor, putative
          Length = 666

 Score =  139 bits (70), Expect = 8e-33
 Identities = 172/206 (83%)
 Strand = Plus / Plus

                                                                       
Query: 13  aagaggccgatccacgcagtggctacatggatacggcggcaaccgccgaaaatcaagact 72
           ||||||||||||||||| || || |||||| ||||  ||||||| || ||   |||  ||
Sbjct: 13  aagaggccgatccacgctgttgcaacatgggtacgaaggcaaccaccaaaggccaaagct 72

                                                                       
Query: 73  tttttagcagtcgtttcggggattgtggctttggtttttcttcgtatggtggttcacgat 132
            |||||||||| || || || || |  ||||| ||||||||| | ||||| ||||| |||
Sbjct: 73  attttagcagtggtgtctggtatggctgctttagtttttcttaggatggttgttcatgat 132

                                                                       
Query: 133 cacgataacctctttgttgcttctgaagctgttcatgccgttggaatttctgtcttaatc 192
           ||||||||||| ||||||||| |||| ||||||||||||||||| || ||||||||||| 
Sbjct: 133 cacgataacctttttgttgctgctgaggctgttcatgccgttggtatctctgtcttaatt 192

                                     
Query: 193 tacaagctcatgaaggaaaagacttg 218
           || |||||||||||||| ||||||||
Sbjct: 193 tataagctcatgaaggagaagacttg 218