Jatropha Genome Database

JcCB0697011.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0697011.10 + phase: 0 
         (456 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011278 WRKY transcription factor, putative                     107   6e-23
29693.m002060 WRKY transcription factor, putative                      54   7e-07
29717.m000222 WRKY transcription factor, putative                      52   3e-06

>30190.m011278 WRKY transcription factor, putative
          Length = 558

 Score =  107 bits (54), Expect = 6e-23
 Identities = 90/102 (88%)
 Strand = Plus / Plus

                                                                       
Query: 297 accacaaagaattgcatttcatactaggagtgcagatgatattcttgacgacggttatag 356
           ||||||||||||  | |||||||||||||||||||||||||||||||| || || | |||
Sbjct: 273 accacaaagaatctcctttcatactaggagtgcagatgatattcttgatgatgggtttag 332

                                                     
Query: 357 atggcgaaaatatggacagaaagttgtcaaaaacagcatcca 398
            ||||||||||| |||||||||| ||| || |||||||||||
Sbjct: 333 gtggcgaaaatacggacagaaagctgtgaagaacagcatcca 374


>29693.m002060 WRKY transcription factor, putative
          Length = 933

 Score = 54.0 bits (27), Expect = 7e-07
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 349 ggttatagatggcgaaaatatggacagaaag 379
           |||||||||||| ||||||||||||||||||
Sbjct: 502 ggttatagatggagaaaatatggacagaaag 532


>29717.m000222 WRKY transcription factor, putative
          Length = 1728

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 337  attcttgacgacggttatagatggcgaaaatatggacagaaagttgtcaa 386
            ||||||||||| || ||||||||| | |||||||| |||||||| |||||
Sbjct: 1216 attcttgacgatggatatagatggaggaaatatgggcagaaagtagtcaa 1265