Jatropha Genome Database

JcCB0696091.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0696091.10 + phase: 0 /pseudo
         (461 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29640.m000405 EH-domain-containing protein, putative                  178   2e-44

>29640.m000405 EH-domain-containing protein, putative
          Length = 1653

 Score =  178 bits (90), Expect = 2e-44
 Identities = 229/278 (82%), Gaps = 13/278 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaatatcttcaggaccaatcggttcttgctctaaagataatcaaaagatctacctt 60
           |||||||||||| | || ||| | ||||||||||||||||| || ||||||||||| |||
Sbjct: 1   atggaaatatctgctggtccagttggttcttgctctaaagagaaccaaaagatctatctt 60

                                                                       
Query: 61  gagtggtttaattttgctgattcagatggcgatggtcgaattactggcaatgacgctata 120
           || ||||||  |||||||||||||||||| |||||| |||| || || ||||| ||||||
Sbjct: 61  gaatggtttgcttttgctgattcagatggtgatggtagaatcaccggtaatgatgctata 120

                                                                       
Query: 121 aaattttttggcatgtctaatctatctcgacaagatcttaagcaggt------------- 167
           ||||| ||||| ||||| ||| ||||||| || ||||| ||||||||             
Sbjct: 121 aaattctttggaatgtccaatttatctcggcaggatctcaagcaggtatgggcaattgca 180

                                                                       
Query: 168 tattctaaacgacaaggatatcttggcttcaatgagtttatcactgctatgcagttaatt 227
            ||||||||||||| || ||||| |||||||||||||| || ||| ||||||||||||||
Sbjct: 181 aattctaaacgacagggttatctcggcttcaatgagttcattacttctatgcagttaatt 240

                                                 
Query: 228 tctttagcgcaagcaggacatgaaataactcatgatct 265
           |||||||| ||||| |||||| ||||| | ||||||||
Sbjct: 241 tctttagctcaagctggacatcaaatagcacatgatct 278