Jatropha Genome Database

JcCB0695691.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0695691.10 - phase: 1 /TE/partial
         (353 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008782 DNA polymerase zeta catalytic subunit, putative         297   2e-80

>30128.m008782 DNA polymerase zeta catalytic subunit, putative
          Length = 6201

 Score =  297 bits (150), Expect = 2e-80
 Identities = 204/222 (91%)
 Strand = Plus / Plus

                                                                       
Query: 129 cttaaaggtaattctggttcgaaaagacagtatgtgcatggctgcagtcttgtccgagca 188
           |||||||||||| ||||||| | ||||||| |||| || |||||||||||||| ||||||
Sbjct: 196 cttaaaggtaatgctggttcaagaagacagcatgttcacggctgcagtcttgtacgagca 255

                                                                       
Query: 189 aggaaattttatggttacaattcatcagaagagttgtttgtcaagatatacctctattat 248
           |||||||||||||||||| |||||||||||||| | ||| ||||||||||||||||||||
Sbjct: 256 aggaaattttatggttaccattcatcagaagagctctttttcaagatatacctctattat 315

                                                                       
Query: 249 ccacatgatgtctctcgtgctgctaatcttcttctgggaggagcagttctagataaaagt 308
           ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||
Sbjct: 316 ccacatgatgtctctcgtgctgccaatcttcttctgggaggagcaattcttgataaaagt 375

                                                     
Query: 309 ttgaagcctcatgaatctcatatccctttcattctccagttt 350
           ||| ||||||||||| ||||||| |||||||| |||||||||
Sbjct: 376 ttgcagcctcatgaagctcatattcctttcatactccagttt 417