Jatropha Genome Database
- JcCB0693041.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0693041.10 + phase: 0 /pseudo/partial
(815 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29646.m001077 ketol-acid reductoisomerase, chloroplast precursor... 615 e-175
29900.m001612 ketol-acid reductoisomerase, chloroplast precursor... 337 6e-92
>29646.m001077 ketol-acid reductoisomerase, chloroplast precursor,
putative
Length = 1755
Score = 615 bits (310), Expect = e-175
Identities = 548/628 (87%), Gaps = 7/628 (1%)
Strand = Plus / Plus
Query: 195 tttctcttgactttgaaacctctgttttcaagaaggagaaggtctctctagctggacgtg 254
|||||||||| |||||||| ||||||||||||| ||||| ||||||| ||||| | ||
Sbjct: 212 tttctcttgattttgaaactactgttttcaagaaagagaaaatctctcttgctggccatg 271
Query: 255 atgagtg-------agaggagggagagatttattcaagctgcttccagatgcattcaagg 307
| |||| ||||| ||||||||| | |||||| |||| || ||||| ||||| |
Sbjct: 272 acgagtacattgtaagaggggggagagatctgttcaagttgctacctgatgctttcaaag 331
Query: 308 gaattaagcagattggagtcatcggttggggttctcagggtcctgcccaagctcaaaatt 367
|||| ||||||||||| || || ||||||||||| ||||||||||| |||||||| ||||
Sbjct: 332 gaatcaagcagattggtgttattggttggggttcccagggtcctgctcaagctcagaatt 391
Query: 368 taagggattctctggccgaagccaagtctgatattacagtaaagattggactcaggaagg 427
||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 392 taagggattctctaggagaagccaagtctgatattgtagtaaagattggactcaggaagg 451
Query: 428 gatcccgttcgtttgctgaagctcgtgctgctggttttaccgaggagaatggaacttcag 487
|||| ||||| ||||||||||||||| ||||||||||||| || |||||||| |||| |
Sbjct: 452 gatctcgttcatttgctgaagctcgttctgctggttttactgaagagaatgggactttgg 511
Query: 488 gtgatatatgggaaacgatttcaggcagtgaccttgtgatgctattgatatctgatgcag 547
|||| || |||||||| |||| |||||||| ||||| | ||||||||||||||||| |
Sbjct: 512 gtgacatttgggaaactgtttctggcagtgatcttgtactcctattgatatctgatgctg 571
Query: 548 cacaggccgataattatgaaaaaattttctcctatatgaaaccaaacagcatacttggac 607
| ||||| ||||||||||| ||| | |||||| ||||||| ||||||||||||||||| |
Sbjct: 572 cgcaggctgataattatgagaaagtgttctcccatatgaagccaaacagcatacttggtc 631
Query: 608 tttcccatggatttctacttggccatttacagtcaatgggaattgacttcccaaaaaaca 667
|||||||||||||||| ||||| ||||| |||||||||||| | ||||||||||| || |
Sbjct: 632 tttcccatggatttcttcttggacatttgcagtcaatgggactcgacttcccaaagaata 691
Query: 668 ttagtgtgattgctgtgtgtcccaaaggaatgggtccatctgtgagaagactctatgtcc 727
||||||| ||||||||||||||||| |||||||||||||||||||| ||||| ||||| |
Sbjct: 692 ttagtgttattgctgtgtgtcccaagggaatgggtccatctgtgaggagactttatgttc 751
Query: 728 aaggcaaagagataaatggtgctggaattaattctagttttgcggtccatcaggatgttg 787
|||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||
Sbjct: 752 aaggcaaagagataaatggtgctggaataaattctagttttgcagtccaccaggatgttg 811
Query: 788 atggtagagcaacagatgttgccttggg 815
|||||||||| |||||||||||||||||
Sbjct: 812 atggtagagccacagatgttgccttggg 839
>29900.m001612 ketol-acid reductoisomerase, chloroplast precursor,
putative
Length = 1785
Score = 337 bits (170), Expect = 6e-92
Identities = 422/506 (83%)
Strand = Plus / Plus
Query: 310 attaagcagattggagtcatcggttggggttctcagggtcctgcccaagctcaaaattta 369
|||||||||||||| ||||| || ||||| |||||||| || || |||||||| |||||
Sbjct: 364 attaagcagattggtgtcattggctggggatctcaggggccagctcaagctcagaatttg 423
Query: 370 agggattctctggccgaagccaagtctgatattacagtaaagattggactcaggaaggga 429
||||||||||| || || || || ||||||||| ||||||||||| || ||||||||
Sbjct: 424 agggattctcttgctgatgcaaaatctgatattgttgtaaagattgggctgaggaagggc 483
Query: 430 tcccgttcgtttgctgaagctcgtgctgctggttttaccgaggagaatggaacttcaggt 489
||||| || ||||| |||||||||||||| || || || |||||||| ||||||| ||
Sbjct: 484 tcccgctcttttgccgaagctcgtgctgcagggttcactgaggagaacggaactttgggg 543
Query: 490 gatatatgggaaacgatttcaggcagtgaccttgtgatgctattgatatctgatgcagca 549
|| ||||||||||| ||| | |||||||| ||||| || ||||||| |||||||| |||
Sbjct: 544 gacatatgggaaaccattgctggcagtgatcttgtcttgttattgatttctgatgctgca 603
Query: 550 caggccgataattatgaaaaaattttctcctatatgaaaccaaacagcatacttggactt 609
||||| ||||| ||||||| || |||||| | ||||||||||||||||| ||||| |||
Sbjct: 604 caggcagataacaatgaaaagatattctcccacatgaaaccaaacagcatccttgggctt 663
Query: 610 tcccatggatttctacttggccatttacagtcaatgggaattgacttcccaaaaaacatt 669
|||||||| ||||| || || |||||||| || |||| ||||||| || || |||||
Sbjct: 664 tcccatggttttcttctgggacatttacaatctttggggcttgactttcctaagaacata 723
Query: 670 agtgtgattgctgtgtgtcccaaaggaatgggtccatctgtgagaagactctatgtccaa 729
||||| |||||||| || ||||| || ||||| || ||||| || || || ||||| ||
Sbjct: 724 agtgttattgctgtttgccccaaggggatggggccttctgtaaggaggctttatgttcag 783
Query: 730 ggcaaagagataaatggtgctggaattaattctagttttgcggtccatcaggatgttgat 789
|| ||||| |||||||| || ||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 784 ggaaaagaaataaatggagccggaattaattccagttttgctgtccaccaggatgttgat 843
Query: 790 ggtagagcaacagatgttgccttggg 815
|||||||| |||||||||||||||||
Sbjct: 844 ggtagagctacagatgttgccttggg 869