Jatropha Genome Database

JcCB0689591.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0689591.10 + phase: 0 /pseudo/partial
         (699 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29748.m000380 Pectinesterase-2 precursor, putative                    305   2e-82

>29748.m000380 Pectinesterase-2 precursor, putative
          Length = 1053

 Score =  305 bits (154), Expect = 2e-82
 Identities = 397/478 (83%)
 Strand = Plus / Plus

                                                                       
Query: 153 gaatgaggctccaactggggtggcttttacatcgcaaaaccagtcggtggcggcatttgt 212
           |||||||||||| ||||||||||||||||| || |||||||| || || || ||||||||
Sbjct: 447 gaatgaggctcccactggggtggcttttacctctcaaaaccaatcagtagcagcatttgt 506

                                                                       
Query: 213 gggtgcagaccagatcgcattctatcactgcggattttatagcacccataatactttatt 272
           ||||||||||  | | |||||||| ||||| | |||||| |||||||| || ||| ||||
Sbjct: 507 gggtgcagacatggttgcattctaccactgtgcattttacagcacccacaacactctatt 566

                                                                       
Query: 273 tgattacaaaggaaggcactattatgaaagttgctacattcagggctcaatcgatttcat 332
           |||||||||||| || |||||||||||    ||||||||||| |||||||| || || ||
Sbjct: 567 tgattacaaaggcagacactattatgaccactgctacattcaaggctcaattgactttat 626

                                                                       
Query: 333 ctttggacgtgcaagatccattttttataactgtgagctctttgggattgaagacatgag 392
           |||||| ||||||||||| |||||  ||| |||||||||||||| ||||| |||| ||||
Sbjct: 627 ctttggtcgtgcaagatcaattttccatagctgtgagctctttgtgattgcagacttgag 686

                                                                       
Query: 393 ggtgaagattcttgggtcaataacagcccataacagagaaacagaagataatagtggatt 452
           ||||||||| | |||||| || || ||||||||||| ||| || | ||| ||||||| ||
Sbjct: 687 ggtgaagatccatgggtccatcactgcccataacagggaatcacatgatgatagtgggtt 746

                                                                       
Query: 453 tgtttttgtcaagggaaaggtttatggtgttgctagtgtctatctgggaagagcaaaagg 512
           ||| |||||||| ||||||||||||||| ||| |  ||| ||  | |||||||| |||||
Sbjct: 747 tgtctttgtcaaaggaaaggtttatggtattggtgatgtttacttaggaagagctaaagg 806

                                                                       
Query: 513 tgcttattctaggaccatctttgcaaaggcctatctctctaattctgtagcaccacaagg 572
           ||| ||||| ||||| || ||||||||| | || || ||||   || | |  ||   |||
Sbjct: 807 tgcctattccaggactatttttgcaaagacatacctttctaggactattgatcctagagg 866

                                                                     
Query: 573 ttggactaattggagctacaatggcgccacagataagcttttccaagcggagtacaaa 630
           |||||||||||||||||||| |||| ||||||| || ||||||||||| |||||||||
Sbjct: 867 ttggactaattggagctacagtggcaccacagaaaaccttttccaagcagagtacaaa 924



 Score = 87.7 bits (44), Expect = 8e-17
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                       
Query: 28  cagagaaaaggtacacattccaagagagaaaccttatatattcataagagggaatggaaa 87
           |||||||||||||||||||||||   | ||||| ||||| ||| | ||||||||||||||
Sbjct: 282 cagagaaaaggtacacattccaaagaacaaaccctatattttcttgagagggaatggaaa 341

                                   
Query: 88  aggaaggacagcccttgtctggtc 111
           ||||||||||||||| || |||||
Sbjct: 342 aggaaggacagccctggtttggtc 365