Jatropha Genome Database

JcCB0689281.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0689281.10 - phase: 0 /partial
         (803 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28448.m000363 electron transporter, putative                          299   1e-80

>28448.m000363 electron transporter, putative
          Length = 1275

 Score =  299 bits (151), Expect = 1e-80
 Identities = 315/369 (85%), Gaps = 18/369 (4%)
 Strand = Plus / Plus

                                                                       
Query: 453 ttcattgtcaaagcctttatggaagcatttatcagaggaatcctttctttctaatatgga 512
           ||||||||| |||||||| |||||||||||||||||||||||  |||| ||||| |||||
Sbjct: 606 ttcattgtccaagcctttgtggaagcatttatcagaggaatcacttctgtctaacatgga 665

                                                                       
Query: 513 tccaaatgttgtttccagttacaggcgtgcattatcatcaaggcaattaggctacactaa 572
           ||| ||||||||||| ||||||||||||||||| || ||||||||||| || || |||||
Sbjct: 666 tcctaatgttgtttctagttacaggcgtgcattgtcgtcaaggcaattgggttatactaa 725

                                                                       
Query: 573 agaatccaaaagtat---aaaatcagttggttctagtcccatcaattcttcat----tca 625
           |||||||||  |||    || |||||| ||||||||||| || |||| |||||    |||
Sbjct: 726 agaatccaagtgtacggcaagatcagtaggttctagtcctatgaattattcatcagctca 785

                                                                       
Query: 626 --agaatgggttcattttcca---------agataacaaaattgttctatattatacaag 674
             | ||||| ||| |||| ||         |||| ||||||||||  | |||| ||||||
Sbjct: 786 taaaaatggcttctttttgcataatactagagatgacaaaattgtcttgtattttacaag 845

                                                                       
Query: 675 tttgagaggaattagaaaaacttatgaggattgttgtgcagtaagaatgatattcagggg 734
           |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 846 tttgagaggaattagaaagacttatgaggactgttgtgcagtcagaatgatattcagggg 905

                                                                       
Query: 735 ttttcgagttcccgtcgatgaaagagacatttcaatggattcttcatatagaaaagagtt 794
           |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 906 ttttcgagttccagtcgatgaaaaagacatttcaatggattcttcatatagaaaagagtt 965

                    
Query: 795 gcagagtat 803
           ||| |||||
Sbjct: 966 gcaaagtat 974



 Score =  149 bits (75), Expect = 3e-35
 Identities = 102/111 (91%)
 Strand = Plus / Plus

                                                                       
Query: 6   tagagctctttctcttcaaacccctcttgttcatcatccaccttcaagaaaaggtgattc 65
           |||||| |||||||||||||| ||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 183 tagagcactttctcttcaaactcctcttgttcaccatcctccttcaaaaaaaggtgattc 242

                                                              
Query: 66  tcatcatcttgtttctcttacttctactacttatggctctcttctccttat 116
           |||||| ||||||||||| ||||| |||||||||||||||||||| |||||
Sbjct: 243 tcatcaccttgtttctctcacttccactacttatggctctcttcttcttat 293