Jatropha Genome Database

JcCB0687271.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0687271.10 - phase: 1 /partial
         (683 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29883.m001985 histone acetyltransferase gcn5, putative                339   1e-92

>29883.m001985 histone acetyltransferase gcn5, putative
          Length = 1686

 Score =  339 bits (171), Expect = 1e-92
 Identities = 258/287 (89%)
 Strand = Plus / Plus

                                                                       
Query: 336 aagatatttacggagaatttgcaaactagtggagcttatagcgctagagaagaaaatctg 395
           ||||||||||| |||||||||||||| ||||| || ||||| ||||||||||||| | | 
Sbjct: 544 aagatatttactgagaatttgcaaaccagtggcgcatatagtgctagagaagaaagttta 603

                                                                       
Query: 396 aagagagaggaggaagcaggaagactcaagtttgtatgtctttcaaatgatggtattgat 455
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aagagagaggaagaagcaggaagactcaagtttgtatgtctttcaaatgatggtattgat 663

                                                                       
Query: 456 gagcatatggtttggctgataggattgaagaatatatttgcaaggcaattgcccaacatg 515
           |  || ||||| ||| |||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 664 gcccacatggtctggttgataggattgaagaacatatttgccaggcaattgcctaacatg 723

                                                                       
Query: 516 cccaaggagtatattgtccgccttgtgatggatagaagccataaatccgtcatggttatc 575
           || |||||||| |||||||| ||||| |||||| ||||||| |||||||||||||| |||
Sbjct: 724 cctaaggagtacattgtccgtcttgtcatggatcgaagccacaaatccgtcatggtcatc 783

                                                          
Query: 576 aggcataatcatgttgttggtggcatcacgtatcgtccgtatgtcag 622
           || | |||||| ||||||||||||||||| |||||||| ||||||||
Sbjct: 784 agacgtaatcacgttgttggtggcatcacatatcgtccatatgtcag 830



 Score =  153 bits (77), Expect = 2e-36
 Identities = 199/239 (83%), Gaps = 3/239 (1%)
 Strand = Plus / Plus

                                                                       
Query: 24  gctgactccgactctgacgctgacgattcagacgccgtggttgacgatgatgaggatgaa 83
           ||||| |||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||| 
Sbjct: 247 gctgattccgactccgacgccgacgattcagacgccgtcgttgatgatgacgaggatgag 306

                                                                       
Query: 84  ttcgacaatgactcctccatgcgcacattcaccgccgcccgtctgcagactaatgccgga 143
           || ||||| ||||||||||||||||| ||||  ||||| |||||  |||| |||||||||
Sbjct: 307 tttgacaacgactcctccatgcgcacgttcaatgccgcgcgtctcgagaccaatgccgga 366

                                                                       
Query: 144 gcgtcggccaccggagctggctccggtggaggcggagggtcttcagctcgtaatacgaag 203
           || || ||  |||| | ||| |||||||| |||   ||||| || ||||| ||||| |||
Sbjct: 367 gcctccgctcccggcggtggttccggtggtggc---gggtcgtcggctcggaatacaaag 423

                                                                      
Query: 204 ttgaaggcggaaaattcgacggtgaagatagaaaagtcggatggcgggaaggatggtgg 262
            | ||| |||| ||||||||||| ||||| |||||||  ||||||||||| ||||||||
Sbjct: 424 ataaagacggagaattcgacggttaagattgaaaagttagatggcgggaaagatggtgg 482