Jatropha Genome Database

JcCB0684951.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0684951.10 - phase: 0 /partial
         (417 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006861 serine palmitoyltransferase, putative                   478   e-134

>30131.m006861 serine palmitoyltransferase, putative
          Length = 1467

 Score =  478 bits (241), Expect = e-134
 Identities = 363/404 (89%), Gaps = 3/404 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    gagcttatacaatacttgaagtacacttgccctgctcatctatatgcaacctcaatctcg 60
            |||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||| 
Sbjct: 973  gagcttattcaatacttgaagtacacttgccctgcccatctgtatgcaacatcaatctca 1032

                                                                        
Query: 61   cctccagctgcagaacaaataatatctgccataaaggttattcttggggaagatggttct 120
            || ||||| || || ||||| |||||| |||| ||||||||||||||||| |||||||| 
Sbjct: 1033 ccaccagcagctgagcaaattatatcttccattaaggttattcttggggaggatggttca 1092

                                                                        
Query: 121  aatagaggtgctcagaaacttgcacgaatacgtgaaaatagcaacttctttaggtcagaa 180
            || |||||||| ||||| ||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 1093 aacagaggtgcacagaagcttgcgcgtatacgtgagaatagcaacttctttaggtcagaa 1152

                                                                        
Query: 181  ttgataaaaatggggtttgaggttcttggagacaatgactctcctgtaatgccaattatg 240
            |||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 ttgcaaaagatggggtttgaggttcttggagacaatgactctcctgtaatgccaattatg 1212

                                                                        
Query: 241  ctttacaatccagctaaaattcccgccttttcaagggagtgcctgaggcagaatgtggca 300
            ||||| |||||||| |||||||||||||| ||||||||||   | |   ||   || |||
Sbjct: 1213 ctttataatccagccaaaattcccgccttctcaagggagtnnntca---agggagtagca 1269

                                                                        
Query: 301  gttgtgacagtggcttttccagcaacaccactattgttggctagggcacgcatatgcata 360
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1270 gttgtgacagtggcttttccagcaaccccactattgttggctagggcacgcatatgcata 1329

                                                        
Query: 361  tctgcttctcataccaaggaagacctgattaaagcattggaagt 404
            |||||||||||||| ||||||||| |||||||||| ||||||||
Sbjct: 1330 tctgcttctcatactaaggaagacttgattaaagctttggaagt 1373