Jatropha Genome Database
- JcCB0682391.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0682391.10 - phase: 2 /partial
(1079 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013805 hmg-CoA reductase, putative 496 e-139
29682.m000571 hmg-CoA reductase, putative 123 2e-27
30162.m001288 hmg-CoA reductase, putative 80 3e-14
>30170.m013805 hmg-CoA reductase, putative
Length = 1731
Score = 496 bits (250), Expect = e-139
Identities = 547/646 (84%)
Strand = Plus / Plus
Query: 342 tagcctcggaggatgacgaaaacatcgtcaaatccgtcgtgaatggaacgattccttcct 401
||||||||||||| |||||| | |||||||||||||| ||||||||||| || ||||| |
Sbjct: 470 tagcctcggaggaagacgaagagatcgtcaaatccgtagtgaatggaacaatcccttcat 529
Query: 402 attctctggaatcaaagctcggggattgcaaacgagcggcaacaattcgacgcgaggctt 461
||||| ||||||| |||||||| || |||||||||||||| ||||||||||| ||||| |
Sbjct: 530 attctttggaatcgaagctcggtgactgcaaacgagcggctacaattcgacgagaggcgt 589
Query: 462 tgcaaaggacgacaggaaggtcgctggatggtttaccagtggatgggttcgattacgagt 521
|||| |||| || || ||||||||||| ||||| ||| | || ||||||||||||||||
Sbjct: 590 tgcagaggatgatggggaggtcgctggagggtttgccattagaagggttcgattacgagt 649
Query: 522 cgattctagggcagtgctgtgaaatgccagtcggatacgtgcagattccagtaggaattg 581
||||| ||||||||||||| |||||||| || || |||||||||||||| || |||||||
Sbjct: 650 cgattttagggcagtgctgcgaaatgccggtggggtacgtgcagattccggtgggaattg 709
Query: 582 cgggaccgctattgctagacggacgcgagtactctgttccgatggcgactacggagggtt 641
| || || | ||| | || || || |||||||||||||||||||| || ||||| ||||
Sbjct: 710 ccgggcctttgttgttggatgggcgtgagtactctgttccgatggccaccacggaaggtt 769
Query: 642 gtttggtggcgagcaccaatagagggtgtaaggcgatctacttgtcaggtggggctacca 701
|||||||||||||||| || ||||| || ||||||||| | |||||||||||||| | ||
Sbjct: 770 gtttggtggcgagcactaacagaggatgcaaggcgatccatttgtcaggtggggccaaca 829
Query: 702 gcgtgttgttgaaagattgcatgacaagagcgcctgttgttcgttttgaatcagtgacaa 761
| ||||||||||| ||| ||||||| ||||||||||||||| | |||| || | |||
Sbjct: 830 gtgtgttgttgaaggatggcatgacgagagcgcctgttgttagatttgggtcggctgcaa 889
Query: 762 gagctgcagatttgaagttctttttggagaatcctgaaaattttgacaccttggccgttg 821
|||| || || || || || || |||||||||||||| ||||| || |||||| ||||||
Sbjct: 890 gagccgcggagttaaaatttttcttggagaatcctgagaatttcgataccttgtccgttg 949
Query: 822 tctttaacaggtcaagtagatttgcgaggctccaaggcgttaaatgtgctattgccggca 881
| ||||||||||| ||||||||||||| ||| |||| | || |||| || ||||| || |
Sbjct: 950 tttttaacaggtcgagtagatttgcgaagcttcaagccattcaatgcgcaattgcgggta 1009
Query: 882 agaatgtttatgtaagatttagttgcagcactggtgatgcaatggggatgaacatggttt 941
||||| | ||| | ||||| || ||||||||||| || ||||||||||||||||||||||
Sbjct: 1010 agaatctatatatgagattcagctgcagcactggcgacgcaatggggatgaacatggttt 1069
Query: 942 ccaaaggggtgcaaaacgttcttgaattccttaagaatgatttccc 987
|||||||||| |||||||||||||| || ||| | |||||||||||
Sbjct: 1070 ccaaaggggttcaaaacgttcttgattttcttcaaaatgatttccc 1115
Score = 258 bits (130), Expect = 6e-68
Identities = 235/270 (87%)
Strand = Plus / Plus
Query: 5 ttcttcacgctgttcttctcggtggcatattaccttctccaccggtggcgtgacaagatc 64
|||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 157 ttcttcaccttgttcttctcggtggcgtattaccttctccaccgctggcgtgacaagatc 216
Query: 65 cgcaactctactcccctccacatcgttaccctctctgagattgccgccattgtctccctc 124
||||| |||||||| || ||| || |||| |||||||| || ||||||||||||||||||
Sbjct: 217 cgcaattctactcctcttcacgtccttactctctctgaaatcgccgccattgtctccctc 276
Query: 125 attgcttccttcatttatctcctcggattctttggaatcgattttgttcaatcatttatt 184
|| || ||||||||||| || || ||||| |||||||||||||||||||||||||| |||
Sbjct: 277 atcgcatccttcatttaccttcttggattttttggaatcgattttgttcaatcattcatt 336
Query: 185 gcacgcgcctcccatgatgcgtgggacctcgacgatacggatcccgcctaccttatcaac 244
||||||| || ||||| |||||||||| |||| | ||||||| | |||||| ||||
Sbjct: 337 acacgcgcttctcatgagtcgtgggaccttgacggtgcggatcctgactacctcatcagg 396
Query: 245 gaagatcaccgtctcgttacgtgccctccc 274
|||||||| || |||||||| |||||||||
Sbjct: 397 gaagatcatcgcctcgttacctgccctccc 426
>29682.m000571 hmg-CoA reductase, putative
Length = 1731
Score = 123 bits (62), Expect = 2e-27
Identities = 467/602 (77%)
Strand = Plus / Plus
Query: 393 ttccttcctattctctggaatcaaagctcggggattgcaaacgagcggcaacaattcgac 452
||||||| || || || ||||||||||| || || |||||| | || || | ||||| |
Sbjct: 521 ttccttcttactcccttgaatcaaagcttggagactgcaaaagggctgctgctattcgcc 580
Query: 453 gcgaggctttgcaaaggacgacaggaaggtcgctggatggtttaccagtggatgggttcg 512
|||||||| | || |||| ||| || ||||||||||| ||||| || |||||||||| |
Sbjct: 581 gcgaggctcttcagaggatgacgggtaggtcgctggaaggtttgcccttggatgggtttg 640
Query: 513 attacgagtcgattctagggcagtgctgtgaaatgccagtcggatacgtgcagattccag 572
|||||||||| || | || ||||||||||| |||||| | || ||||| |||||||| |
Sbjct: 641 attacgagtccatattgggtcagtgctgtgagatgccaattgggtacgtccagattcctg 700
Query: 573 taggaattgcgggaccgctattgctagacggacgcgagtactctgttccgatggcgacta 632
| || ||||| || || | ||| | || ||| || ||| |||| || ||||| ||||
Sbjct: 701 ttgggattgctgggccattgttgttggatggaaatgaatacactgtgccaatggcaacta 760
Query: 633 cggagggttgtttggtggcgagcaccaatagagggtgtaaggcgatctacttgtcaggtg 692
|||| ||||| | ||||| |||||||||||||| || ||||| || || | || || |
Sbjct: 761 cggaaggttgccttgtggcaagcaccaatagaggatgcaaggctatttatgtttctggag 820
Query: 693 gggctaccagcgtgttgttgaaagattgcatgacaagagcgcctgttgttcgttttgaat 752
||||||| ||||||| ||| ||||||| || || |||||||| | ||| ||
Sbjct: 821 gggctacttctactttgttgagggatggcatgaccagggctcctgttgtcaggtttcaaa 880
Query: 753 cagtgacaagagctgcagatttgaagttctttttggagaatcctgaaaattttgacacct 812
| | ||||||||| || |||||||||| ||||| ||||| | ||||||||||||
Sbjct: 881 ctgctcaaagagctgctgagctgaagttcttcatggaggatcctaacaattttgacacca 940
Query: 813 tggccgttgtctttaacaggtcaagtagatttgcgaggctccaaggcgttaaatgtgcta 872
| ||| |||| || |||| |||||| ||||||| ||||||||| |||| |||||||||
Sbjct: 941 ttgcccttgttttcaacaagtcaagcagatttggaaggctccaaagcgtccaatgtgcta 1000
Query: 873 ttgccggcaagaatgtttatgtaagatttagttgcagcactggtgatgcaatggggatga 932
| || || || ||| |||| | || ||||| |||||||| |||||||| ||||||||||
Sbjct: 1001 tagcaggaaaaaatctttacatgaggtttaggtgcagcacaggtgatgccatggggatga 1060
Query: 933 acatggtttccaaaggggtgcaaaacgttcttgaattccttaagaatgatttccctgaca 992
||||||| |||||||| || ||||| || || || | ||| | ||||| ||||||||||
Sbjct: 1061 acatggtctccaaaggagtccaaaatgtcctggattatcttcaaaatgaattccctgaca 1120
Query: 993 tg 994
||
Sbjct: 1121 tg 1122
>30162.m001288 hmg-CoA reductase, putative
Length = 1761
Score = 79.8 bits (40), Expect = 3e-14
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 861 ttaaatgtgctattgccggcaagaatgtttatgtaagatttagttgcagcactggtgatg 920
|||| ||||||||||| ||||| ||| ||||| | ||||| ||||||||||||||||||
Sbjct: 1013 ttaagtgtgctattgctggcaaaaatctttatttgagattctgttgcagcactggtgatg 1072
Query: 921 caatggggatgaacatggtttccaaagg 948
| ||||| ||||| ||||| ||||||||
Sbjct: 1073 ctatgggcatgaatatggtatccaaagg 1100