Jatropha Genome Database

JcCB0669741.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0669741.10 - phase: 0 /partial
         (278 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006257 mads box protein, putative                              208   1e-53

>29908.m006257 mads box protein, putative
          Length = 486

 Score =  208 bits (105), Expect = 1e-53
 Identities = 195/225 (86%)
 Strand = Plus / Plus

                                                                       
Query: 17  caaggtataatctgcattcaaataatatcgacaaacttggccgaccatctcttgaattgc 76
           |||||||||||||||| || |||||  | ||||||||||  |  ||||||||||||||||
Sbjct: 17  caaggtataatctgcactccaataacctggacaaacttgatcagccatctcttgaattgc 76

                                                                       
Query: 77  aacttgaaaatagcaatcacgctcggttgagcaaggaggtggctgaaaagactcatcaac 136
           | || |||||||||||| ||   ||||||||||||||||| ||||| ||||| |||||||
Sbjct: 77  agctagaaaatagcaataacatccggttgagcaaggaggttgctgataagacccatcaac 136

                                                                       
Query: 137 tcaggcagatgaggggagaggatctgcgaggcctaaatgtggaggaattacagcaattgg 196
           | ||||||||||||||||||||||||| ||| |||| | | |||||||| || |||||||
Sbjct: 137 taaggcagatgaggggagaggatctgcaaggactaagtatagaggaattgcaacaattgg 196

                                                        
Query: 197 aaaaaatgcttgaatcaggacttacccgtgtgcttgaaactaagg 241
           | || |||||||||||||||||||||||||| ||| |||||||||
Sbjct: 197 agaagatgcttgaatcaggacttacccgtgtacttcaaactaagg 241