Jatropha Genome Database

JcCB0652571.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0652571.10 + phase: 1 /pseudo/partial
         (390 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29991.m000627 dtdp-glucose 4-6-dehydratase, putative                  230   5e-60

>29991.m000627 dtdp-glucose 4-6-dehydratase, putative
          Length = 1122

 Score =  230 bits (116), Expect = 5e-60
 Identities = 239/280 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcttgatgtgtacaacgacaagatctagcaccttctcgaaccggaaacactcacttggg 60
           ||||||| || ||||||||||||||| |||||||||| ||||||||  |  |  ||||||
Sbjct: 131 ctcttgacgtctacaacgacaagatcaagcaccttcttgaaccggattctttaccttggg 190

                                                                       
Query: 61  cggaccggatccagttccaccgcctcaatatcaagcatgactctcgtcttgaaggcttaa 120
           | | ||||||||||||||||||  | |||||||||||||| |||||  | |||||| | |
Sbjct: 191 ctggccggatccagttccaccgtattaatatcaagcatgattctcgcttggaaggcctta 250

                                                                       
Query: 121 tcaagatgtcggatctgactataaatctggcggcgatctgtacaccggccgattacaata 180
           |||||||| |||||||||| |||||||| || |||||||| |||||||| ||||| ||||
Sbjct: 251 tcaagatggcggatctgacgataaatctagctgcgatctgcacaccggcggattataata 310

                                                                       
Query: 181 cacgtccattagacacgatttacagcaattttattgatgcgctccctgtggtgaagtact 240
           | ||||| || || ||||||||||||||||| || |||||||| |||||||| |||||||
Sbjct: 311 cgcgtcctttggatacgatttacagcaatttcatagatgcgctgcctgtggtaaagtact 370

                                                   
Query: 241 gttcggagaacaacaagcgtctaattcacttctccacttg 280
           |||| ||||| ||||| ||| ||||||||||||| |||||
Sbjct: 371 gttcagagaataacaaacgtttaattcacttctcaacttg 410