Jatropha Genome Database
- JcCB0646891.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0646891.10 - phase: 0 /partial
(216 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014108 40S ribosomal protein S9, putative 246 4e-65
29813.m001450 40S ribosomal protein S9, putative 204 2e-52
29822.m003493 40S ribosomal protein S9, putative 151 2e-36
>30147.m014108 40S ribosomal protein S9, putative
Length = 594
Score = 246 bits (124), Expect = 4e-65
Identities = 190/212 (89%)
Strand = Plus / Plus
Query: 1 gagaagaacccacgccggatctttgagggtgaggctcttctccgcaggatgaatagatat 60
||||||||||||||||||||||||||||||||||| ||||| || || ||||| | |||
Sbjct: 196 gagaagaacccacgccggatctttgagggtgaggcccttcttcgaagaatgaaccgctat 255
Query: 61 ggtcttttggatgagagtcaaaacaagcttgattatgtgttggctttgactgtggagaac 120
|| ||| | || ||||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 256 ggccttctcgaagagagccagaacaagcttgattatgtgttggccttgactgtggagaac 315
Query: 121 tttcttgagcgtcgcctgcagacacttgttttcaagtctggtatggctaagtctatccac 180
||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 316 tttcttgagcgccgcctgcagacacttgtattcaagtctggtatggcaaagtccatccac 375
Query: 181 catgctcgagtgcttattaggcagaggcatat 212
|||||| |||| ||||| || |||||||||||
Sbjct: 376 catgctagagtccttatcagacagaggcatat 407
>29813.m001450 40S ribosomal protein S9, putative
Length = 591
Score = 204 bits (103), Expect = 2e-52
Identities = 154/171 (90%)
Strand = Plus / Plus
Query: 46 aggatgaatagatatggtcttttggatgagagtcaaaacaagcttgattatgtgttggct 105
||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 241 aggatgaataggtatggacttttggatgagagccaaaacaagcttgattacgtgttggcc 300
Query: 106 ttgactgtggagaactttcttgagcgtcgcctgcagacacttgttttcaagtctggtatg 165
|||||||| |||||||| |||||||| || || || |||||||| |||||||||||||||
Sbjct: 301 ttgactgttgagaacttccttgagcgccgtcttcaaacacttgtgttcaagtctggtatg 360
Query: 166 gctaagtctatccaccatgctcgagtgcttattaggcagaggcatattagg 216
||||||||||||||||||||| ||||||| || |||||||| || ||||||
Sbjct: 361 gctaagtctatccaccatgctagagtgctcatcaggcagagacacattagg 411
>29822.m003493 40S ribosomal protein S9, putative
Length = 591
Score = 151 bits (76), Expect = 2e-36
Identities = 178/212 (83%)
Strand = Plus / Plus
Query: 1 gagaagaacccacgccggatctttgagggtgaggctcttctccgcaggatgaatagatat 60
||||| ||||| ||||| || ||||| ||||| || |||||||| |||||||| | |||
Sbjct: 196 gagaaaaacccccgccgtatttttgaaggtgaagcccttctccgtaggatgaaccggtat 255
Query: 61 ggtcttttggatgagagtcaaaacaagcttgattatgtgttggctttgactgtggagaac 120
||||||||||||||||| || |||||||| |||||||| | || |||| || ||||||
Sbjct: 256 ggtcttttggatgagagccagaacaagctcgattatgtccttgccctgacagtagagaac 315
Query: 121 tttcttgagcgtcgcctgcagacacttgttttcaagtctggtatggctaagtctatccac 180
|| ||||||||||| || || || ||||| ||||| ||||| ||||| ||||| ||||||
Sbjct: 316 ttccttgagcgtcggctccaaacccttgtgttcaaatctggaatggcaaagtccatccac 375
Query: 181 catgctcgagtgcttattaggcagaggcatat 212
|||||||| |||||||| ||||| ||||||||
Sbjct: 376 catgctcgtgtgcttatcaggcaaaggcatat 407