Jatropha Genome Database

JcCB0645811.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0645811.10 - phase: 0 /pseudo
         (309 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29634.m002113 sugar transporter, putative                             123   6e-28

>29634.m002113 sugar transporter, putative
          Length = 1461

 Score =  123 bits (62), Expect = 6e-28
 Identities = 184/224 (82%), Gaps = 3/224 (1%)
 Strand = Plus / Plus

                                                                       
Query: 25  gatggacttaggaaaccgttccttcatacgggtagttggtataaaatgggctcgaggcaa 84
           |||||| | ||||||||||| || || || || |||||||||| |||| | |||||||| 
Sbjct: 28  gatggagtaaggaaaccgttgctgcacacaggaagttggtatagaatgagttcgaggcag 87

                                                                       
Query: 85  tccagcatcatgggctcctccacccag---atccgcgatggtgcggtttctgtcgtcctc 141
           ||||| || |||||||| ||  | |||   || || ||||| || |||||||| ||||||
Sbjct: 88  tccagtatgatgggctcttcttctcagtacattcgtgatggcgctgtttctgttgtcctc 147

                                                                       
Query: 142 tgtgtcctcatcgtcgctttgggccctatccaatttggttttacctgtggatattcttcg 201
           || ||||| ||||| ||| |||| || |||||||||||||| ||||| ||||||||||||
Sbjct: 148 tgcgtccttatcgttgctctgggtccaatccaatttggtttcacctgcggatattcttcg 207

                                                       
Query: 202 cctacgcaagcagagatcatcaaagatcttaaactctctatttc 245
           ||||| |||||||| ||||| |  |||||||| ||||| |||||
Sbjct: 208 cctacacaagcagaaatcattagggatcttaatctctcaatttc 251