Jatropha Genome Database
- JcCB0642431.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0642431.10 + phase: 0 /pseudo
(827 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013936 nitrate transporter, putative 161 8e-39
>30170.m013936 nitrate transporter, putative
Length = 1638
Score = 161 bits (81), Expect = 8e-39
Identities = 390/493 (79%)
Strand = Plus / Plus
Query: 93 gaatcaatgcgaggccgcaaccggcggccaagaagcagttcttttcactggtctgtacct 152
|||||||||||| || ||||| | ||||||| ||| |||||| || |||| | |||||
Sbjct: 297 gaatcaatgcgatgctgcaactagtagccaagaggcaattctttacattggtgtctacct 356
Query: 153 tctggcattaggtaccagtggtgttaaagctggtctgccatctctaggagctgaccattt 212
| | ||| | ||||| ||||| || ||| || | ||||||| | ||||||||||| ||
Sbjct: 357 tattgcacttggtacaagtggggtcaaatcttctttgccatccatgggagctgaccaatt 416
Query: 213 tgatgaaaaagatcctaaggaagcagcacagttgtctagttttttcaactggttcttgtt 272
|||||||| || || ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 417 cgatgaaaatgacccaaaggaagcagctcagttgtctagctttttcaactggttcttgtt 476
Query: 273 tagcctcaccattggaaatataatcggtgtcacttcaattgtctggataagcacaaatca 332
|||||| || |||||| |||| | || ||||||| |||| |||||||| || || ||
Sbjct: 477 tagccttacaattggaggtatatttggagtcacttttcttgtatggataagtaccaacca 536
Query: 333 aggttggaaatggtcgtttgtaatctgtactacagctgttttgtgctctataatcttctt 392
||||||| | ||| |||| | ||||| | ||| ||||| | |||||||||||||
Sbjct: 537 aggttgggatctgtcatttggtgtgtgtacaatagcagttttatttgctataatcttctt 596
Query: 393 gtctacgggaaagtcattatatcaaaataatgtacctgaaggaagcactatccttcgctt 452
|| | ||| ||||| || |||| ||||||| ||| |||||||| | ||||||| |
Sbjct: 597 gtgcatggggaagtccttgtatcgaaataataaacccaaaggaagccccttccttcggat 656
Query: 453 tatgcaggtatttttagctgcaactagaaacagaaaccttccaatccctgacatgacaga 512
| |||||| || | | ||| ||||| |||||||||||||||| || ||||||||
Sbjct: 657 tgcacaggtacttgtggttgctgtaagaaatcgaaaccttccaatcccagagatgacaga 716
Query: 513 ggaattatatgaaattcacgacaaggaaatagggaaacaagatgaaatcctcaaaaggac 572
||| || |||||||||| ||||| |||| |||||| |||||||||||||| ||||||||
Sbjct: 717 tgaactacatgaaattcatgacaaagaaacagggaagcaagatgaaatcctaaaaaggac 776
Query: 573 tgatcaattcagg 585
| |||||||||||
Sbjct: 777 taatcaattcagg 789
Score = 133 bits (67), Expect = 2e-30
Identities = 153/179 (85%), Gaps = 2/179 (1%)
Strand = Plus / Plus
Query: 650 tatgcacagttacacaaattgaaggaaacaaaaatcttaattcgcatggttccaattata 709
||||||||||||||||| |||||| |||||||||| | |||||||| ||||||| |||
Sbjct: 836 tatgcacagttacacaagttgaag-aaacaaaaattcttcttcgcatgcttccaatcata 894
Query: 710 cttagcacagtgttcttgaacacatgtttagctcaacttcaaactttcactatccaaca- 768
||||| ||||| ||| |||| |||||| ||||||| || || |||||||| | |||||
Sbjct: 895 cttagtacagttttcatgaatacatgtctagctcagctccagactttcacagtacaacag 954
Query: 769 agcacaacaatggacacaaatttgttcgggtttcacatacctgccccttcaattccagt 827
|||||||||||||||||||||||| | || ||||||||||| | ||| |||||||||||
Sbjct: 955 agcacaacaatggacacaaatttgcttggctttcacataccaggcccctcaattccagt 1013