Jatropha Genome Database
- JcCB0627221.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0627221.10 - phase: 2 /partial
(897 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29576.m000233 transcription factor, putative 515 e-145
29576.m000226 transcription factor, putative 432 e-120
30169.m006420 transcription factor, putative 52 6e-06
>29576.m000233 transcription factor, putative
Length = 1326
Score = 515 bits (260), Expect = e-145
Identities = 442/502 (88%), Gaps = 3/502 (0%)
Strand = Plus / Plus
Query: 1 agggaaaaaggggtcaccatggcagcgtgttaaatggactgataaaatggtgaggctttt 60
||||||||| || || ||||||||||| ||||| |||||||||||||||||||||||| |
Sbjct: 315 agggaaaaaaggatcgccatggcagcgggttaagtggactgataaaatggtgaggcttct 374
Query: 61 gataactgccgtatcttacattggagaggatgtgacttcggattgtggtggtggcatgag 120
|||||||| || |||||||| |||||||| ||||||||||||| ||| | ||||||||
Sbjct: 375 aataactgctgtgtcttacataggagaggacgtgacttcggattatggcagcggcatgag 434
Query: 121 aaggaaatttgctgttttacagaaaaaaggcaagtggaaatcagtttcaaaagtcatggc 180
|||||||||| |||| |||| ||||| || |||||||||||||||||||| ||||||||
Sbjct: 435 aaggaaattttctgtcctacaaaaaaagggaaagtggaaatcagtttcaaaggtcatggc 494
Query: 181 tgaaaggggtcaccatgtttcaccccagcagtgtgaggataagttcaatgaccttaacaa 240
|||||||||||||| ||||||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 495 tgaaaggggtcaccttgtttcacctcagcaatgtgaggataaattcaatgaccttaacaa 554
Query: 241 aaggtataaaaagctcaacgacatgcttggaaggggcacttcttgccaggttgtggagaa 300
||| ||||||||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 555 aagatataaaaagctcaacgacatgctaggcaggggcacttcttgccaagttgtggagaa 614
Query: 301 cccagcacttttggaatatatag---atttatccgaaaaagagaaagaggatgttaggaa 357
||||||||| | || ||||| ||||| | || ||||||||||| |||||||||||
Sbjct: 615 tccagcacttctagatgttatagattatttaacagagaaagagaaagatgatgttaggaa 674
Query: 358 aatattgagctcaaagcatcttttctatgaagagatgtgttcataccataatgcaaacag 417
|||||| |||||||| ||||| |||||||||||||||||||| |||||||||| ||| ||
Sbjct: 675 aatattaagctcaaaacatctgttctatgaagagatgtgttcctaccataatggaaatag 734
Query: 418 attgcatctgcctcatgatccagcattacagcgttccttacagttggctctaagaagtaa 477
| ||||| ||||||| ||||| ||| | ||||||||| ||||||| ||||| ||||||||
Sbjct: 735 actgcatttgcctcacgatcctgcactgcagcgttccctacagttagctcttagaagtaa 794
Query: 478 agatgatcatgatagtgatgat 499
||||| |||||||| |||||||
Sbjct: 795 agatggtcatgataatgatgat 816
Score = 244 bits (123), Expect = 8e-64
Identities = 228/263 (86%)
Strand = Plus / Plus
Query: 635 aaaaggctgagaccaggcctgggccatgaagatgcttgttttgggaattcatcgcaggac 694
|||||| |||||| ||||| |||||||||||||| |||||||| ||| ||||| |||||
Sbjct: 952 aaaaggttgagacaaggccagggccatgaagatgtttgttttgtgaactcatctcaggat 1011
Query: 695 ggtaataaaggttcatattctcatgtgcagattccccaagttgatatgaatcaaatctca 754
|| ||||||||||| ||||| || | |||||| || |||||||||||||||||| ||||
Sbjct: 1012 gggaataaaggttctcattctaatttccagatttccgaagttgatatgaatcaaaactca 1071
Query: 755 cctgaaagttcaagagcagcttggttacagaagcaatggatggaatctcgctcacttcag 814
||||| || ||| ||||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 1072 cctgagtgtacaaaagcagcttggttacagaagcagtggatggagtctcgtgcacttcag 1131
Query: 815 ttagaagagcaaaaggtacaaattcaacttgagatgttagagctagaaaaacagcgattc 874
||||||||||||||| ||||||||||| |||||| ||| || | ||||| |||||||||
Sbjct: 1132 ttagaagagcaaaagctacaaattcaaattgagacgttggaattggaaaagcagcgattc 1191
Query: 875 aagtggaaaagatttagcaggaa 897
|||||| ||||||||||| ||||
Sbjct: 1192 aagtggcaaagatttagccggaa 1214
>29576.m000226 transcription factor, putative
Length = 1338
Score = 432 bits (218), Expect = e-120
Identities = 442/516 (85%), Gaps = 3/516 (0%)
Strand = Plus / Plus
Query: 1 agggaaaaaggggtcaccatggcagcgtgttaaatggactgataaaatggtgaggctttt 60
|||||||||||||||||| |||| ||| || || ||||||||||| ||||||||||||||
Sbjct: 327 agggaaaaaggggtcaccttggcggcgggtaaagtggactgataagatggtgaggctttt 386
Query: 61 gataactgccgtatcttacattggagaggatgtgacttcggattgtggtggtggcatgag 120
|||||||| || ||||| || || || ||| || ||||||||||| |||||| || ||
Sbjct: 387 aataactgctgtttcttatataggtgaagatatgtcttcggattgtaatggtggaattag 446
Query: 121 aaggaaatttgctgttttacagaaaaaaggcaagtggaaatcagtttcaaaagtcatggc 180
||||||||| || |||||||||| |||||||||||||||| ||| ||||| | ||||||
Sbjct: 447 aaggaaattcgcagttttacagagaaaaggcaagtggaaactagtctcaaaggccatggc 506
Query: 181 tgaaaggggtcaccatgtttcaccccagcagtgtgaggataagttcaatgaccttaacaa 240
|||||||||| |||||||||||| ||||| || |||||||| |||||||||||||||||
Sbjct: 507 tgaaaggggtttccatgtttcacctcagcaatgcgaggataaattcaatgaccttaacaa 566
Query: 241 aaggtataaaaagctcaacgacatgcttggaaggggcacttcttgccaggttgtggagaa 300
||||||||||| || || ||||| ||||| ||||||||||||||||| ||||| |||||
Sbjct: 567 aaggtataaaagacttaatgacatacttgggaggggcacttcttgccaagttgttgagaa 626
Query: 301 cccagcacttttggaatatataga---tttatccgaaaaagagaaagaggatgttaggaa 357
||| || |||||||| |||||| |||| | || |||| ||||| |||||||||||
Sbjct: 627 ccctgcgcttttggatgttatagattttttaacagagaaagcaaaagatgatgttaggaa 686
Query: 358 aatattgagctcaaagcatcttttctatgaagagatgtgttcataccataatgcaaacag 417
|||||||||||| |||||||| ||||||||||| ||||| || || || |||| || ||
Sbjct: 687 aatattgagctcgaagcatctcttctatgaagaaatgtgctcgtatcacaatgataatag 746
Query: 418 attgcatctgcctcatgatccagcattacagcgttccttacagttggctctaagaagtaa 477
||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||
Sbjct: 747 attgcatctgcctcatgatccagcattgcagcattccttacagttggctcttagaagaaa 806
Query: 478 agatgatcatgatagtgatgatttaagaaggcacca 513
||| |||||||||| ||||||| | |||||| ||||
Sbjct: 807 agaggatcatgataatgatgatatgagaaggaacca 842
Score = 232 bits (117), Expect = 3e-60
Identities = 177/197 (89%)
Strand = Plus / Plus
Query: 701 aaaggttcatattctcatgtgcagattccccaagttgatatgaatcaaatctcacctgaa 760
||||| || ||||||||| |||||||||| ||||||||||| ||||| || ||| |||||
Sbjct: 1030 aaaggctcctattctcatttgcagattcctcaagttgatataaatcagatgtcatctgaa 1089
Query: 761 agttcaagagcagcttggttacagaagcaatggatggaatctcgctcacttcagttagaa 820
||| | |||||||||| |||||||||||| |||||||||||| || ||||||||||||||
Sbjct: 1090 agtactagagcagctttgttacagaagcagtggatggaatcttgcacacttcagttagaa 1149
Query: 821 gagcaaaaggtacaaattcaacttgagatgttagagctagaaaaacagcgattcaagtgg 880
||||||||| | |||||||||||||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 1150 gagcaaaagctccaaattcaacttgaaatgttggagctcgaaaaacagcgatttaagtgg 1209
Query: 881 aaaagatttagcaggaa 897
|||||||||||||||||
Sbjct: 1210 aaaagatttagcaggaa 1226
>30169.m006420 transcription factor, putative
Length = 1365
Score = 52.0 bits (26), Expect = 6e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 341 aaagaggatgttaggaaaatattgagctcaaagcatct 378
||||| ||||||||||| |||||||||||||| |||||
Sbjct: 676 aaagaagatgttaggaagatattgagctcaaaacatct 713