Jatropha Genome Database

JcCB0623091.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0623091.20 - phase: 0 /pseudo/partial
         (357 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006605 Cycloartenol synthase, putative                         228   2e-59
27446.m000472 Cycloartenol synthase, putative                          50   9e-06

>30169.m006605 Cycloartenol synthase, putative
          Length = 2235

 Score =  228 bits (115), Expect = 2e-59
 Identities = 239/280 (85%), Gaps = 9/280 (3%)
 Strand = Plus / Plus

                                                                        
Query: 74   agaaatatgtagctctggaaggaaagcgatcaaatttggtacatacaacttgggcaatga 133
            |||||||||| ||||| ||||||||| |||  ||||||||||||||  | |||| |||||
Sbjct: 1946 agaaatatgtggctctcgaaggaaagagatggaatttggtacataccgcatggggaatga 2005

                                                                        
Query: 134  tgggtctgatg------ggactgcgcatggatagagaccctacacctcttcaccgagctg 187
            ||||||||||       |||| |   ||||||||||| || | ||||||||||  |||||
Sbjct: 2006 tgggtctgattaatggtggacag---atggatagagatccaaaacctcttcacgcagctg 2062

                                                                        
Query: 188  caacgctgataattaattcccaattggaagatggagattttcctcaacaggaaatcacag 247
            ||| ||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 2063 caaagcttataatcaattcccaattggaagatggagattttcctcaacaggagatcacgg 2122

                                                                        
Query: 248  gggtgttcatgaagaactgcatgttacactatgcagcatacaggaacatctatccattat 307
            | |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | |
Sbjct: 2123 gtgtgttcatgaagaactgcatgttacattatgcagcatacagaaatatctatccactgt 2182

                                                    
Query: 308  gggctctggcagaatacagaaaccgagttccattgccttc 347
            |||| ||||||||||||||||| || ||||| ||| ||||
Sbjct: 2183 gggccctggcagaatacagaaatcgtgttcctttgacttc 2222


>27446.m000472 Cycloartenol synthase, putative
          Length = 2274

 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 223  gattttcctcaacaggaaatcacaggggtgttcatgaagaactgcatgttacactatgca 282
            |||||||| |||||||||   | ||| || ||||||| ||| || |||||||||||||||
Sbjct: 2137 gattttccacaacaggaacaaataggagtattcatgaggaattgtatgttacactatgca 2196

                 
Query: 283  gcata 287
            |||||
Sbjct: 2197 gcata 2201