Jatropha Genome Database

JcCB0607681.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0607681.10 - phase: 0 /pseudo/partial
         (738 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013829 conserved hypothetical protein                          309   1e-83

>30170.m013829 conserved hypothetical protein
          Length = 1110

 Score =  309 bits (156), Expect = 1e-83
 Identities = 347/410 (84%), Gaps = 3/410 (0%)
 Strand = Plus / Plus

                                                                       
Query: 73  cagacaattgccataattgcagtcagagaaggcataattcaattgggttcatttgataag 132
           ||||||||||| || ||| |||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 478 cagacaattgctatcatttcagtcagagaaggcatcattcagttgggttcatttgacaag 537

                                                                       
Query: 133 attgcagaagatctcaatttggtgatcaatgtacagaggaaattcagctatctccaaagc 192
           || || |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 538 atagcggaagatctcaatctggtgattaatgtacaaaggaaattcagctatctccagagc 597

                                                                       
Query: 193 ataccaggagtttttgcaatgcaaagaccgtacctaccaatccaacatccatacattctc 252
           ||||||||||| ||||| || ||||| ||||||||||||||||| |||||||||||||| 
Sbjct: 598 ataccaggagtctttgccatacaaaggccgtacctaccaatccagcatccatacattctt 657

                                                                       
Query: 253 aaaccgaatacccggacgatagaaagtgaagaaataggtttctcagttgatgat---aaa 309
           ||||| |||||| ||| | |||| ||  |||||| |   |||||| ||||||||   || 
Sbjct: 658 aaacccaataccaggatggtagagagccaagaaacaacattctcaattgatgataacaag 717

                                                                       
Query: 310 cgccaaataactggggtaaagagattatttgacgaaagctttgatgattctcctctcaag 369
           | |||||||| | | | ||||||||| ||||| ||||| || || ||   |||| |||||
Sbjct: 718 caccaaataattagagaaaagagattgtttgatgaaagattcgacgacaatcctatcaag 777

                                                                       
Query: 370 tccattaatttaggtttgaacagtccacaaaatggcattacagggccacccatttggtca 429
           ||||| |  || |||| |||||  ||||||||||| ||| ||||  ||||||||||||||
Sbjct: 778 tccatcagcttgggttggaacaacccacaaaatggaattgcaggagcacccatttggtca 837

                                                             
Query: 430 attccacctcttttgcctaccatgtcttgtagtcttggagctttgctatc 479
           |||||| |||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 838 attccaactcttttgccaaccatgtcttgcagtctgggagctttgctatc 887