Jatropha Genome Database

JcCB0603751.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0603751.10 - phase: 0 /partial
         (425 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013949 1-deoxy-D-xylulose 5-phosphate reductoisomerase, c...   573   e-163

>30147.m013949 1-deoxy-D-xylulose 5-phosphate reductoisomerase,
            chloroplast precursor, putative
          Length = 1404

 Score =  573 bits (289), Expect = e-163
 Identities = 379/409 (92%)
 Strand = Plus / Plus

                                                                        
Query: 14   tagaagttattgaagcccattatttgttgggagctgactatgataatattgagatagtaa 73
            ||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 866  tagaagtaattgaagcccattatttgtttggagctgactatgataacattgagatagtaa 925

                                                                        
Query: 74   ttcatccacaatctataatacattcaatggttgaaacagaggattcttctgttcttgcac 133
            ||||||| ||||| || |||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 926  ttcatcctcaatccattatacattcaatggtggaaacagaggattcatctgttcttgcac 985

                                                                        
Query: 134  agttggggtggcccgatatgcgcttaccaattctatacaccatgtcatggccagacagaa 193
            ||||||||||||| ||||||||  | |||||||||||||||||||||||||| |||||||
Sbjct: 986  agttggggtggcctgatatgcgtattccaattctatacaccatgtcatggcctgacagaa 1045

                                                                        
Query: 194  tttcctgctctgaaataacctggcctcgccttgatctttgcaagcaagggtctctaacat 253
            ||| ||||||||| |||||||||||||||||||||||||||||||  |||||| ||||||
Sbjct: 1046 tttactgctctgagataacctggcctcgccttgatctttgcaagcttgggtctttaacat 1105

                                                                        
Query: 254  ttaaagctcctgacaatgtaaaatacccatctatggatcttgcctatgctgctggaaggg 313
            ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||
Sbjct: 1106 ttaaagctcctgacaatgtaaaatacccatctatggagcttgcctatgcagctggacggg 1165

                                                                        
Query: 314  caggaggcaccatgacaggagttcttagtgcagctaatgagaaagctgtggagatgttca 373
            | |||||||||||||||||||| || ||||| ||||| ||||||||||| ||||||||||
Sbjct: 1166 ctggaggcaccatgacaggagtcctcagtgctgctaacgagaaagctgtagagatgttca 1225

                                                             
Query: 374  tcgatgaaaagataagctatcttgacattttcaagattgtggagctaac 422
            |||||||| |||| ||||| |||||||||||||||||||||||||||||
Sbjct: 1226 tcgatgaacagatcagctaccttgacattttcaagattgtggagctaac 1274