Jatropha Genome Database

JcCB0599321.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0599321.10 + phase: 0 /partial
         (324 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007230 conserved hypothetical protein                          113   7e-25
30131.m007234 hypothetical protein                                     84   6e-16

>30131.m007230 conserved hypothetical protein
          Length = 1359

 Score =  113 bits (57), Expect = 7e-25
 Identities = 141/169 (83%)
 Strand = Plus / Plus

                                                                        
Query: 9    caggccaaatgaggctcgggctatgtacgaaaaacttcagtctcattcaagtcctaaagt 68
            ||||| |||||| |||| ||| ||||| || ||||| ||||||||  ||| | |||||||
Sbjct: 1035 caggcaaaatgaagctcaggccatgtatgagaaactgcagtctcacccaaatgctaaagt 1094

                                                                        
Query: 69   gagcaagaaagcaaggcaattcatgttcagtttccaggccatggagatgatgaaggttac 128
            |||||||||||| || ||||| ||||||||||| ||||| ||||| ||| ||||||||||
Sbjct: 1095 gagcaagaaagcgagacaatttatgttcagttttcaggctatggaaatgctgaaggttac 1154

                                                             
Query: 129  aggctcaaatttctcacctaaaagcactggctaccggaaatattttgag 177
            ||| |||| ||||| |||  ||||||| || || | ||| |||||||||
Sbjct: 1155 agggtcaagtttcttaccagaaagcacaggatatcagaactattttgag 1203


>30131.m007234 hypothetical protein
          Length = 267

 Score = 83.8 bits (42), Expect = 6e-16
 Identities = 90/106 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgattgacaggccaaatgaggctcgggctatgtacgaaaaacttcagtctcattcaagt 60
           ||||||||||||| ||||||||||| ||| ||||| || ||||||||||||||| ||  |
Sbjct: 106 atgattgacaggcgaaatgaggctcaggccatgtatgagaaacttcagtctcatccagat 165

                                                         
Query: 61  cctaaagtgagcaagaaagcaaggcaattcatgttcagtttccagg 106
            || ||||| ||||||||||||| ||  | | ||||||||||||||
Sbjct: 166 gctgaagtgtgcaagaaagcaagacagattaagttcagtttccagg 211