Jatropha Genome Database
- JcCB0590711.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0590711.10 + phase: 0 /partial
(768 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30040.m000267 conserved hypothetical protein 882 0.0
30131.m006948 conserved hypothetical protein 54 1e-06
>30040.m000267 conserved hypothetical protein
Length = 3063
Score = 882 bits (445), Expect = 0.0
Identities = 688/768 (89%), Gaps = 2/768 (0%)
Strand = Plus / Plus
Query: 1 attaataagttagctgctgtcagaatcaatggcatggttgaaaggttacaacagtctcag 60
||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 2239 attaacaagttagctgctgtcagaatcaatggtatggttgaaaggctacaacagtctcag 2298
Query: 61 cagcatataagggagaatgtgtatcacctttttcaacaaatacttagtcagcggacatct 120
||||||||||| |||||||| |||| || ||||||||| | || ||||||| ||| |||
Sbjct: 2299 cagcatataagagagaatgtctatcgtctatttcaacaagttctcagtcagcagacgtct 2358
Query: 121 ttgttctttaaccgtcatattgatcagatcatcctttgttgtttctatggagttgcaaag 180
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2359 ttgttctttaatcgtcatattgaccagattatcctttgttgtttctatggagttgcaaag 2418
Query: 181 atttctaaagtgaatctaaccttcagggagatcattttcaattataggaagcagccacaa 240
|||||||| |||||| ||||||||||||||||||||| ||| || ||||| || ||||||
Sbjct: 2419 atttctaaggtgaatttaaccttcagggagatcatttacaactacaggaaacaaccacaa 2478
Query: 241 tgtaaaccacaagttttccgcagtgtgtttattgattggtcatcagcacgccacaatggg 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2479 tgtaaaccacaagttttccgcagtgtgtttgttgattggtcatcagcacgccacaatggg 2538
Query: 301 aggacaggccaagatcatgttgatattattacattttacaatgaaatattcattcctgct 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2539 aggacgggccaagatcatgttgatattattacattttacaatgaaatattcattcctgct 2598
Query: 361 gcgaagcctttgctggtggaggttggttctgctggagcaatcacaaaagctagtccaaca 420
||||||||||||||||||||||||||||| |||||| || | ||||| || |
Sbjct: 2599 gcgaagcctttgctggtggaggttggttcagctggaataaccgtaaaaggcagccaggtt 2658
Query: 421 cctgaagtcaataataataaagatggtcaatgccctgcatcacctaaagtatcgcctttt 480
|| ||||| ||||| ||||||||||||||||| ||||| ||||||||||| || ||||||
Sbjct: 2659 ccagaagttaataacaataaagatggtcaatgtcctgcttcacctaaagtttctcctttt 2718
Query: 481 ccaagtctccctgatatgtctccaaagaaagtttctgcaacacataatgtgtatgtctct 540
|||||||| ||||||||||| || |||||||| |||||| | || |||||||||||||||
Sbjct: 2719 ccaagtctgcctgatatgtccccgaagaaagtctctgcagcgcacaatgtgtatgtctct 2778
Query: 541 ccattacggacgtccaagatggatgctttaatatcacatagctcaaaaagctattatgct 600
||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 2779 ccattgcggacatccaagatggatgctttaatctcacatagctcaaaaagctactatgca 2838
Query: 601 tgtgtgggagagagcactcatgcataccagagcccttcaaaagacctgactgcaatcaac 660
|||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 2839 tgtgtgggggagagcactcatgcatatcagagcccttcgaaagacctgactgcaatcaat 2898
Query: 661 aatcgtttaaatggtaataggaaggtcagaggcacactgaaacttttgacgacgttgacg 720
||||| || |||||||||||||| ||||||| |||| || ||||||||| || || |
Sbjct: 2899 aatcgcttgaatggtaataggaatatcagaggatcacttaa--ttttgacgatgtcgatg 2956
Query: 721 ttggtctggttaatgattctacggtgtccaagagcctctaccttcaaa 768
||||| |||||| ||| |||| |||| |||||||||||||||| ||||
Sbjct: 2957 ttggtttggttagtgactctatggtggccaagagcctctacctccaaa 3004
>30131.m006948 conserved hypothetical protein
Length = 1839
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 478 tttccaagtctccctgatatgtctccaaagaaagtttctgcaacacataatgtgtatgtc 537
|||||||| || ||||| || |||||||||||||| || || |||||||||| ||| ||
Sbjct: 1528 tttccaagccttcctgacatttctccaaagaaagtctccccatcacataatgtctatctc 1587
Query: 538 tctccattacg 548
|||||| ||||
Sbjct: 1588 tctccagtacg 1598