Jatropha Genome Database

JcCB0587121.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0587121.10 - phase: 2 /pseudo/partial
         (781 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008721 conserved hypothetical protein                          127   1e-28
29738.m001041 conserved hypothetical protein                           86   4e-16

>30174.m008721 conserved hypothetical protein
          Length = 948

 Score =  127 bits (64), Expect = 1e-28
 Identities = 100/112 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   agctcaaggaccaagagaccgcagaatgagattgtctctaaaagttgctcgagaattctt 60
           |||||| || ||||||||||| |||||||||||||| || ||||||||||| ||||||||
Sbjct: 150 agctcaggggccaagagaccggagaatgagattgtcacttaaagttgctcgtgaattctt 209

                                                               
Query: 61  tgatctacaagacaagttatgttttgataaagcaagcaaaactgttgagtgg 112
           |||||| ||||||||| | || ||||||||||| |||||||| |||||||||
Sbjct: 210 tgatctgcaagacaagctttgctttgataaagctagcaaaaccgttgagtgg 261


>29738.m001041 conserved hypothetical protein
          Length = 1350

 Score = 85.7 bits (43), Expect = 4e-16
 Identities = 97/115 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   agctcaaggaccaagagaccgcagaatgagattgtctctaaaagttgctcgagaattctt 60
           ||||||||| ||||||||| | |||||||| ||||||||  || ||||| |  | |||||
Sbjct: 405 agctcaagggccaagagacaggagaatgaggttgtctcttcaaattgctaggaagttctt 464

                                                                  
Query: 61  tgatctacaagacaagttatgttttgataaagcaagcaaaactgttgagtggcta 115
           |||||||||||||| |||| | || |||||||||||||||||  |||| ||||||
Sbjct: 465 tgatctacaagacatgttaggcttcgataaagcaagcaaaacaattgactggcta 519