Jatropha Genome Database
- JcCB0579241.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0579241.10 + phase: 0 /partial
(790 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28093.m000117 Cellulose synthase A catalytic subunit 6 [UDP-form... 266 2e-70
29863.m001055 Cellulose synthase A catalytic subunit 6 [UDP-form... 212 2e-54
29606.m000101 Cellulose synthase A catalytic subunit 6 [UDP-form... 206 1e-52
29848.m004649 Cellulose synthase A catalytic subunit 6 [UDP-form... 163 2e-39
29637.m000754 Cellulose synthase A catalytic subunit 6 [UDP-form... 137 1e-31
29482.m000171 Cellulose synthase A catalytic subunit 3 [UDP-form... 119 3e-26
29761.m000416 Cellulose synthase A catalytic subunit 6 [UDP-form... 101 6e-21
30026.m001452 wd40 protein, putative 80 2e-14
>28093.m000117 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 2487
Score = 266 bits (134), Expect = 2e-70
Identities = 467/578 (80%)
Strand = Plus / Plus
Query: 31 atgaagagagagtatgaagagtttaaagttcggattaatgcattggttgccaaggcacaa 90
||||||||||| |||||||| || |||||||| || |||| ||| ||| ||| |||||
Sbjct: 607 atgaagagagaatatgaagaattcaaagttcgaataaatggattagtttccactgcacag 666
Query: 91 aaggtcccagaagaagggtggacaatgcaggatgggactccatggccagggaataatgtt 150
|| ||||||||||| || ||||||||||||||||| ||||||||||| || || ||||||
Sbjct: 667 aaagtcccagaagacggttggacaatgcaggatggaactccatggcctggaaacaatgtt 726
Query: 151 cgcgatcatccagggatgattcaagttttccttggccaaagtggagggcttgacacagat 210
|| ||||| || || |||||||| || |||||||| || ||||| | | ||| |||
Sbjct: 727 cgagatcaccctggcatgattcaggtcttccttggacatagtggtgttcgtgatgtagaa 786
Query: 211 ggaaatgaactaccacgaatggtgtacgtttccagagaaaagagacctggatttaaccac 270
|||||||| | || || |||| |||||||| | || |||||||| || ||| | |||
Sbjct: 787 ggaaatgagttgcctcgtttggtttacgtttctcgtgagaagagaccaggctttgaacac 846
Query: 271 cacaaaaaggctggagcaatgaatgctttggtcagggtctctgctgtgctcacaaatgct 330
|| |||||||||||||| ||||||||| || | | |||||||| || || ||||||||
Sbjct: 847 cataaaaaggctggagccatgaatgctctgattcgtgtctctgcggttctatcaaatgct 906
Query: 331 ccttatctgttgaatttggattgtgatcactacttcaataatagtaaggctattagagaa 390
|| ||||| ||||| |||||||||||||||| | || || ||||| ||| ||||||||
Sbjct: 907 ccatatcttttgaacgtggattgtgatcactatattaacaacagtaaagctcttagagaa 966
Query: 391 gcaatgtgtttcatgatggatcctttgcttggaaagagagtgtgctatgtccagttccca 450
|| |||||||| ||||||||||| || || |||| ||| || ||||| ||||| ||
Sbjct: 967 gccatgtgttttatgatggatccaacactgggcaagaaagtttgttatgtgcagtttcct 1026
Query: 451 caaaggtttgatggcattgacaggcatgatcgatatgccaatcggaatattgtattcttt 510
||||| || ||||| |||||| | |||||| |||| | ||||||||| |||||||||||
Sbjct: 1027 caaagattcgatggtattgaccgtcatgatagatactcaaatcggaatgttgtattcttt 1086
Query: 511 gatataaacatgaaaggtttggatggcattcaaggacctatatatgttggcactggttgt 570
||||| ||||||||||| || ||||| | ||||| || ||||||||||| |||||||||
Sbjct: 1087 gatatcaacatgaaaggattagatggtttgcaagggccaatatatgttggaactggttgt 1146
Query: 571 gtgttcagaaggcaggcgttctatggatatgatgctcc 608
|| ||| ||||||| || | ||||| |||||||||||
Sbjct: 1147 gttttccgaaggcaagcactttatggttatgatgctcc 1184
>29863.m001055 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3288
Score = 212 bits (107), Expect = 2e-54
Identities = 458/575 (79%)
Strand = Plus / Plus
Query: 31 atgaagagagagtatgaagagtttaaagttcggattaatgcattggttgccaaggcacaa 90
||||||||||| ||||||||||| | |||||| || |||| | ||||| ||| |||||
Sbjct: 1378 atgaagagagaatatgaagagttcagagttcgaataaatggactggtttccactgcacag 1437
Query: 91 aaggtcccagaagaagggtggacaatgcaggatgggactccatggccagggaataatgtt 150
||||| || || || || ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 1438 aaggttcccgaggagggatggacaatgcaggatggaactccatggcctgggaataatgtc 1497
Query: 151 cgcgatcatccagggatgattcaagttttccttggccaaagtggagggcttgacacagat 210
| |||||||| || |||||||| |||||||| || ||| || | | ||| ||
Sbjct: 1498 agagatcatcctggaatgattcaggttttcctgggacaacacggtgttcatgatgttgaa 1557
Query: 211 ggaaatgaactaccacgaatggtgtacgtttccagagaaaagagacctggatttaaccac 270
|||||| ||||||| | |||| ||||| || | || |||||||| |||||| | |||
Sbjct: 1558 ggaaatcaactaccttgtctggtttacgtgtctcgtgagaagagaccaggatttgatcac 1617
Query: 271 cacaaaaaggctggagcaatgaatgctttggtcagggtctctgctgtgctcacaaatgct 330
||||||||||| || ||||||||||||||||| ||||| ||||| | | ||||||||
Sbjct: 1618 cacaaaaaggccggcgcaatgaatgctttggtgagggtatctgcaatcatatcaaatgct 1677
Query: 331 ccttatctgttgaatttggattgtgatcactacttcaataatagtaaggctattagagaa 390
|| || ||| ||||| | ||||||||||| || | ||||| ||||| || || | ||
Sbjct: 1678 ccatacctgctgaatgtcgattgtgatcattatataaataacagtaaagcacttcgtgat 1737
Query: 391 gcaatgtgtttcatgatggatcctttgcttggaaagagagtgtgctatgtccagttccca 450
|| ||||| |||||||||||||| ||| |||| | | || ||||| || || ||
Sbjct: 1738 gctatgtgcttcatgatggatccaacatctggcaagaaaatctgttatgtacaatttcct 1797
Query: 451 caaaggtttgatggcattgacaggcatgatcgatatgccaatcggaatattgtattcttt 510
||||| |||||||| ||||| | |||||| |||| ||||||| ||| |||||||||||
Sbjct: 1798 caaagatttgatgggattgatcgtcatgatagatactccaatcgcaatgttgtattcttt 1857
Query: 511 gatataaacatgaaaggtttggatggcattcaaggacctatatatgttggcactggttgt 570
||||| ||||||||||| ||||||| || |||||||||||||||||||| || || |||
Sbjct: 1858 gatatcaacatgaaaggactggatgggatccaaggacctatatatgttggtacagggtgt 1917
Query: 571 gtgttcagaaggcaggcgttctatggatatgatgc 605
|| ||||||||||||||| | ||||| ||||||||
Sbjct: 1918 gtcttcagaaggcaggcgctgtatgggtatgatgc 1952
>29606.m000101 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3258
Score = 206 bits (104), Expect = 1e-52
Identities = 443/556 (79%)
Strand = Plus / Plus
Query: 22 cggagagcaatgaagagagagtatgaagagtttaaagttcggattaatgcattggttgcc 81
|||||||| ||||||||||| |||||||| |||||||||| || |||| | |||||
Sbjct: 1363 cggagagctatgaagagagaatatgaagaatttaaagttcatatcaatgggcttgttgca 1422
Query: 82 aaggcacaaaaggtcccagaagaagggtggacaatgcaggatgggactccatggccaggg 141
|||||||||||| | || |||||||| |||| ||||| ||||| ||||||||||||||
Sbjct: 1423 aaggcacaaaagattcctgaagaaggatggattatgcaagatggtactccatggccagga 1482
Query: 142 aataatgttcgcgatcatccagggatgattcaagttttccttggccaaagtggagggctt 201
|| || | ||||||||||| |||||||| |||||| | ||||||| |||||| |||
Sbjct: 1483 aacaacaccagagatcatccaggaatgattcaggttttcttaggccaaaatggaggtctt 1542
Query: 202 gacacagatggaaatgaactaccacgaatggtgtacgtttccagagaaaagagacctgga 261
|| | || || |||||||| |||||| | || || ||||| | |||||| | || ||
Sbjct: 1543 gatgctgagggtaatgaactgccacgactagtttatgtttctcgtgaaaagcgtccaggg 1602
Query: 262 tttaaccaccacaaaaaggctggagcaatgaatgctttggtcagggtctctgctgtgctc 321
|| | |||||||| || ||||| || |||||||| | |||||||| || ||||| ||
Sbjct: 1603 ttccaacaccacaagaaagctggtgctatgaatgcacttgtcagggtatcagctgtcctt 1662
Query: 322 acaaatgctccttatctgttgaatttggattgtgatcactacttcaataatagtaaggct 381
|| |||| |||| ||||||||| | ||||||||||||||| | || || || ||||||
Sbjct: 1663 actaatggacctttcctgttgaatcttgattgtgatcactacataaacaacagcaaggct 1722
Query: 382 attagagaagcaatgtgtttcatgatggatcctttgcttggaaagagagtgtgctatgtc 441
| |||||||| ||||||||| |||||||||| ||||| || ||| || |||||
Sbjct: 1723 ttgagagaagctatgtgtttcctgatggatccaaaccttgggaaacaagtatgttatgtt 1782
Query: 442 cagttcccacaaaggtttgatggcattgacaggcatgatcgatatgccaatcggaatatt 501
||||| || || ||||||||||| ||||| ||| |||||||||||||||| || |||| |
Sbjct: 1783 cagtttccccagaggtttgatggtattgataggaatgatcgatatgccaaccgcaatact 1842
Query: 502 gtattctttgatataaacatgaaaggtttggatggcattcaaggacctatatatgttggc 561
|| ||||||||||||||| ||| |||||||||||| | ||||| ||| | ||||| ||
Sbjct: 1843 gttttctttgatataaacttgaggggtttggatggcgtacaaggccctgtttatgtgggt 1902
Query: 562 actggttgtgtgttca 577
||||| ||||| ||||
Sbjct: 1903 actggatgtgtcttca 1918
>29848.m004649 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3252
Score = 163 bits (82), Expect = 2e-39
Identities = 397/502 (79%)
Strand = Plus / Plus
Query: 26 gagcaatgaagagagagtatgaagagtttaaagttcggattaatgcattggttgccaagg 85
|||||||||||||||| |||||||| || || || || ||||||||| | ||||| || |
Sbjct: 1370 gagcaatgaagagagaatatgaagaattcaaggtgcgaattaatgcacttgttgctaaag 1429
Query: 86 cacaaaaggtcccagaagaagggtggacaatgcaggatgggactccatggccagggaata 145
|||||||| | || |||||||| ||||||||||||||||| ||||| ||||| || ||||
Sbjct: 1430 cacaaaagatgcctgaagaaggttggacaatgcaggatggtactccttggcctggaaata 1489
Query: 146 atgttcgcgatcatccagggatgattcaagttttccttggccaaagtggagggcttgaca 205
|| | | || ||||| || ||||| || || ||| | || || | ||| | ||||| |
Sbjct: 1490 atcctagggaccatccgggaatgatccaggtgttcttagggcacaatgggagccttgata 1549
Query: 206 cagatggaaatgaactaccacgaatggtgtacgtttccagagaaaagagacctggattta 265
||||||||||||| |||| ||| | || || ||||| | |||||||||||||| ||
Sbjct: 1550 cagatggaaatgagttacctcgacttgtttatgtttctcgtgaaaagagacctggcttcc 1609
Query: 266 accaccacaaaaaggctggagcaatgaatgctttggtcagggtctctgctgtgctcacaa 325
| || ||||| || |||||||| |||||||| ||| | | || || ||||| | || |
Sbjct: 1610 agcatcacaagaaagctggagctatgaatgcattgattcgagtttcagctgtcttgacca 1669
Query: 326 atgctccttatctgttgaatttggattgtgatcactacttcaataatagtaaggctatta 385
||| | | ||||| || ||| | ||||||||||| ||||| || || || || ||| |||
Sbjct: 1670 atggtgcctatcttttaaatgttgattgtgatcattactttaacaacagcaaagctctta 1729
Query: 386 gagaagcaatgtgtttcatgatggatcctttgcttggaaagagagtgtgctatgtccagt 445
||| |||||||| ||||||||||||||| ||| |||| | |||||||| || |
Sbjct: 1730 aagaggcaatgtgcttcatgatggatcctgcctatggcaagaaaacatgctatgttcaat 1789
Query: 446 tcccacaaaggtttgatggcattgacaggcatgatcgatatgccaatcggaatattgtat 505
||||||| | |||||||||||||| ||||||||||||||||||||| |||||||| |
Sbjct: 1790 tcccacagcgttttgatggcattgatttgcatgatcgatatgccaatcgcaatattgtgt 1849
Query: 506 tctttgatataaacatgaaagg 527
|||||||||| ||| |||||||
Sbjct: 1850 tctttgatatcaacttgaaagg 1871
>29637.m000754 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3135
Score = 137 bits (69), Expect = 1e-31
Identities = 240/297 (80%)
Strand = Plus / Plus
Query: 307 gtctctgctgtgctcacaaatgctccttatctgttgaatttggattgtgatcactacttc 366
|||||||| |||||||| ||||| |||| | ||||||| |||||||||||||| ||| |
Sbjct: 1483 gtctctgcagtgctcaccaatgccccttttatgttgaacttggattgtgatcattacctt 1542
Query: 367 aataatagtaaggctattagagaagcaatgtgtttcatgatggatcctttgcttggaaag 426
|| || || || ||| || ||||| ||||||||| | |||||||| ||| || |||
Sbjct: 1543 aacaacagcaaagctgcaagggaagctatgtgtttcttaatggatccccagctcgggaag 1602
Query: 427 agagtgtgctatgtccagttcccacaaaggtttgatggcattgacaggcatgatcgatat 486
| || |||||||||||||| || |||||||||||||| || || | |||||| |||||
Sbjct: 1603 aaggtctgctatgtccagtttcctcaaaggtttgatggtatcgatcgtcatgatagatat 1662
Query: 487 gccaatcggaatattgtattctttgatataaacatgaaaggtttggatggcattcaagga 546
|| |||||||| | ||| ||||||||||| ||||||||||| ||||||| | |||||
Sbjct: 1663 gctaatcggaacactgtgttctttgatattaacatgaaaggcctggatggtgtccaaggg 1722
Query: 547 cctatatatgttggcactggttgtgtgttcagaaggcaggcgttctatggatatgat 603
|| |||||||||| ||||| ||||| |||| |||||||| || ||||| ||||||
Sbjct: 1723 ccagtatatgttggtactggatgtgtcttcaataggcaggcattgtatggctatgat 1779
Score = 60.0 bits (30), Expect = 2e-08
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 16 aaggaacggagagcaatgaagagagagtatgaagagtttaaagttcggattaatgcattg 75
||||| || ||||||||||||||||| |||||||| || || || ||||||| |||||
Sbjct: 1192 aaggagcgaagagcaatgaagagagaatatgaagaattcaaggtgaagattaattcattg 1251
Query: 76 gttgccaaggcacaaaaggtcccagaagaagggtggacaatgcaggatgggactccatgg 135
|| || ||||| || ||| |||||||| || ||| ||||||||||| |||||||||
Sbjct: 1252 gtggcgaaggctcagaagaaaccagaagagggatgggtgatgcaggatggtactccatgg 1311
Query: 136 cc 137
||
Sbjct: 1312 cc 1313
>29482.m000171 Cellulose synthase A catalytic subunit 3 [UDP-forming],
putative
Length = 2934
Score = 119 bits (60), Expect = 3e-26
Identities = 198/244 (81%)
Strand = Plus / Plus
Query: 341 tgaatttggattgtgatcactacttcaataatagtaaggctattagagaagcaatgtgtt 400
|||| |||||||||||||| || | ||||| || ||||| | ||||||| |||||||
Sbjct: 1421 tgaacttggattgtgatcattatataaataacagcaaggccgtccgagaagccatgtgtt 1480
Query: 401 tcatgatggatcctttgcttggaaagagagtgtgctatgtccagttcccacaaaggtttg 460
|| ||||||||||| | ||||||||| ||| |||||||| ||||| || ||||| ||||
Sbjct: 1481 tcttgatggatcctcagattggaaagaaagtttgctatgtacagtttcctcaaagatttg 1540
Query: 461 atggcattgacaggcatgatcgatatgccaatcggaatattgtattctttgatataaaca 520
|||| ||||| || || ||||||||||| || | || | ||| ||||||||||| ||||
Sbjct: 1541 atggtattgatagacacgatcgatatgcaaacagaaacactgttttctttgatattaaca 1600
Query: 521 tgaaaggtttggatggcattcaaggacctatatatgttggcactggttgtgtgttcagaa 580
|||||||| | ||||| ||||| || || ||||||| || || || ||||| |||||||
Sbjct: 1601 tgaaaggtctagatggaattcagggtccagtatatgtcgggacaggatgtgttttcagaa 1660
Query: 581 ggca 584
||||
Sbjct: 1661 ggca 1664
>29761.m000416 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 2700
Score = 101 bits (51), Expect = 6e-21
Identities = 423/547 (77%)
Strand = Plus / Plus
Query: 31 atgaagagagagtatgaagagtttaaagttcggattaatgcattggttgccaaggcacaa 90
||||||||||| |||||||| |||||| |||| || |||| | || || |||||||||
Sbjct: 1327 atgaagagagaatatgaagaatttaaaattcgtatcaatggcctagtggcaaaggcacaa 1386
Query: 91 aaggtcccagaagaagggtggacaatgcaggatgggactccatggccagggaataatgtt 150
|| || || || ||||| ||| |||||| |||||||| || ||||| || ||||| |
Sbjct: 1387 aaagttcctgatgaaggatgggtaatgcaagatgggacaccttggcctggtaataacatc 1446
Query: 151 cgcgatcatccagggatgattcaagttttccttggccaaagtggagggcttgacacagat 210
| ||||||||||| |||||||| |||||| | ||||| |||||||| ||||||| ||
Sbjct: 1447 agagatcatccaggaatgattcaggttttcttgggccatagtggaggatttgacactgag 1506
Query: 211 ggaaatgaactaccacgaatggtgtacgtttccagagaaaagagacctggatttaaccac 270
|| |||||||| |||||| | || || || || | || ||| | ||||| ||| | ||
Sbjct: 1507 ggtaatgaacttccacgactagtatatgtatctcgtgagaagcgccctggttttcagcat 1566
Query: 271 cacaaaaaggctggagcaatgaatgctttggtcagggtctctgctgtgctcacaaatgct 330
|||||||||||||| || |||||||| | || | || || || || || || ||||
Sbjct: 1567 cacaaaaaggctggtgctatgaatgcacttgtgcgtgtttcagcagttcttaccaatgga 1626
Query: 331 ccttatctgttgaatttggattgtgatcactacttcaataatagtaaggctattagagaa 390
|| | |||||||| | ||||||||||| ||| | || || || | ||| ||||||||
Sbjct: 1627 cccttcttgttgaatctcgattgtgatcattacataaacaacagcagggcacttagagaa 1686
Query: 391 gcaatgtgtttcatgatggatcctttgcttggaaagagagtgtgctatgtccagttccca 450
|| |||||||| | ||||||||| ||||||| ||| ||||| |||||||| ||
Sbjct: 1687 gctatgtgttttctaatggatcctaatcttggaagatcagtttgctacgtccagtttccg 1746
Query: 451 caaaggtttgatggcattgacaggcatgatcgatatgccaatcggaatattgtattcttt 510
|| || |||||||| ||||| || ||||||||||||||||||| || | ||| ||||||
Sbjct: 1747 cagagatttgatgggattgatagaaatgatcgatatgccaatcgaaacactgttttcttt 1806
Query: 511 gatataaacatgaaaggtttggatggcattcaaggacctatatatgttggcactggttgt 570
|||||||| | | ||| ||||||||| | ||||| ||| | || || ||||| ||||||
Sbjct: 1807 gatataaatttaagaggattggatggcgtccaaggccctgtgtacgtgggcacaggttgt 1866
Query: 571 gtgttca 577
|| ||||
Sbjct: 1867 gttttca 1873
>30026.m001452 wd40 protein, putative
Length = 4377
Score = 79.8 bits (40), Expect = 2e-14
Identities = 288/368 (78%), Gaps = 2/368 (0%)
Strand = Plus / Plus
Query: 211 ggaaatgaactaccacgaatggtgtacgtttccagagaaaagagacctggatttaaccac 270
||||||||||| |||||| | || || || |||||||| ||||||||||| | | ||
Sbjct: 2689 ggaaatgaactcccacgacttgtatatgtgtccagagagaagagacctggctaccagcat 2748
Query: 271 cacaaaaaggctggagcaatgaatgctttggtcagggtctctgctgtgctcacaaatgct 330
|||||||||||||| || |||||| |||| || || ||||| || ||||||||||||
Sbjct: 2749 cacaaaaaggctggtgctgaaaatgctctggtgagagtgtctgcagttctcacaaatgct 2808
Query: 331 ccttatctgttgaatttggattgtgatcactacttcaataatagtaaggctattagagaa 390
|| | | | ||| | |||||||| ||||| | || ||||||||||| ||||||||
Sbjct: 2809 cccttcatcctcaatcttgattgtgaccactatgtaaacaatagtaaggcagttagagaa 2868
Query: 391 gcaatgtgtttcatgatggatcctttgcttggaaagaga-gtgtgctatgtccagttccc 449
|||||||| ||| ||||||| || |||| |||| || |||||||| ||||||||
Sbjct: 2869 gcaatgtgcttcctgatggacccacaagttggtc-gagatgtatgctatgtacagttccc 2927
Query: 450 acaaaggtttgatggcattgacaggcatgatcgatatgccaatcggaatattgtattctt 509
|| |||||||||||||| || | | ||||||||||||||| | || | || |||||
Sbjct: 2928 tcagaggtttgatggcatagataagagtgatcgatatgccaacagaaacgtggttttctt 2987
Query: 510 tgatataaacatgaaaggtttggatggcattcaaggacctatatatgttggcactggttg 569
|||| | |||||||| || | ||||||||||||||||| ||||||| || || |||||
Sbjct: 2988 tgatgttaacatgaagggactcgatggcattcaaggaccagtatatgtgggaacaggttg 3047
Query: 570 tgtgttca 577
||| ||||
Sbjct: 3048 tgtattca 3055