Jatropha Genome Database
- JcCB0574741.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0574741.10 + phase: 2 /partial
(781 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29742.m001383 WD-repeat protein, putative 567 e-161
30068.m002545 WD-repeat protein, putative 88 9e-17
28197.m000034 WD-repeat protein, putative 86 4e-16
>29742.m001383 WD-repeat protein, putative
Length = 1827
Score = 567 bits (286), Expect = e-161
Identities = 624/734 (85%), Gaps = 2/734 (0%)
Strand = Plus / Plus
Query: 6 gggctcaaatggttcgagttcgttcatataagaaacggttcaaggaactttcagctcttt 65
||||| |||||||| ||| ||| ||||||||||| |||||||||||| ||||||||||||
Sbjct: 329 gggctaaaatggttagagctcggtcatataagaagcggttcaaggaattttcagctcttt 388
Query: 66 atatgggacaagaagttgcagcccatgaaggttcaattttgactatgaaattcagtcctg 125
||||||||||||| |||| ||||||||||||||||||||| | ||||| ||||||||||
Sbjct: 389 atatgggacaagatattgcggcccatgaaggttcaattttggcaatgaagttcagtcctg 448
Query: 126 atggccagtaccttgcaagtgcaggtgaagatggaatagtgcgtgtttggcaggtgattg 185
|||| ||||||||||||||||| |||||||||||||| |||||| ||||||| || | |
Sbjct: 449 atggtcagtaccttgcaagtgctggtgaagatggaattgtgcgtatttggcatgttttgg 508
Query: 186 agtctgagaggtcagatgagtttggc-agacttgatattgatccatcacatgtatacttc 244
| | ||||| ||| |||||||| | ||| |||| |||||||||| |||||| ||
Sbjct: 509 atttagagagatcaaatgagtttagtgaga-ttgagggtgatccatcatttgtatatttg 567
Query: 245 acagttaatagtcattctgaagtagttccacttcatgccgataaagagaaaaacagtaag 304
| | ||||| | |||||| ||||||| |||||||| ||||||| |||||| ||||
Sbjct: 568 gctgctaataatgtttctgagttagttcctcttcatgctgataaagtgaaaaagggtaaa 627
Query: 305 ttcaaggatttgcgaaaaaattcacactcagcttgtgtcatcttgcctcagaaaatattt 364
||||| || || ||| || ||| ||||||||||||| | | |||| |||| |||||
Sbjct: 628 ctcaagaatctgagaacaagatcagactcagcttgtgttgtaatccctccgaaagtattt 687
Query: 365 cagatatcagagaaaccaatccatgaattttatggtcaccgtggagaggtcttggatctc 424
||||||||||| || | |||||||||||||| |||| ||| ||||| || ||||||
Sbjct: 688 ggaatatcagagaagcccgtacatgaattttatgggcaccatggggaggtattagatctc 747
Query: 425 tcctggtcgaagaacaagtatattttatcatcttctactgataagactgttcgcttgtgg 484
|| ||||| ||||| || | | | | || ||||||||||||||||||||||||||||||
Sbjct: 748 tcatggtcaaagaaaaattgtctactgtcgtcttctactgataagactgttcgcttgtgg 807
Query: 485 caagtgggatgtaaccggtgcctacaagtcttttcccacaataactatgttacatgtgtt 544
|||||||||||||||| ||||| || |||| |||||||||||||||||||||||||||
Sbjct: 808 caagtgggatgtaaccaatgccttcacatcttctcccacaataactatgttacatgtgtt 867
Query: 545 cagtttaatcccatggatgatgattcattcatcagcggttccatagatgggaaagttcgc 604
|| ||||||||||||||||||||||| |||||||| ||||| || ||||||||||| |||
Sbjct: 868 caatttaatcccatggatgatgattccttcatcagtggttcgatcgatgggaaagtacgc 927
Query: 605 atctggacaattcctggttgtcaagttattgactggattgatataaccgaaattgttact 664
|||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 928 atctgggaaattcctggctgtcaagttattgactggattgatataactgaaattgttaca 987
Query: 665 gcagtttgttatcgccctgatggaaagggtctagttgttggctcaatgactggcaattgt 724
|| ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||
Sbjct: 988 gctgtttgttatcgccctgatggaaagggtctagttcttggctccatgaccggcaattgt 1047
Query: 725 cgcttctatgatgc 738
|| || ||||||||
Sbjct: 1048 cgtttttatgatgc 1061
>30068.m002545 WD-repeat protein, putative
Length = 2232
Score = 87.7 bits (44), Expect = 9e-17
Identities = 122/148 (82%)
Strand = Plus / Plus
Query: 463 tgataagactgttcgcttgtggcaagtgggatgtaaccggtgcctacaagtcttttccca 522
||||||||| ||||| | ||||||||||||||| || | || || ||||||||| ||
Sbjct: 1188 tgataagacagttcgtctctggcaagtgggatgtgacagatgtctgagagtcttttctca 1247
Query: 523 caataactatgttacatgtgttcagtttaatcccatggatgatgattcattcatcagcgg 582
||||| |||||||| |||||| | || ||||| ||||||||| | | |||||||| ||
Sbjct: 1248 taataattatgttacttgtgttgacttcaatcctatggatgataactatttcatcagtgg 1307
Query: 583 ttccatagatgggaaagttcgcatctgg 610
||| |||||||| |||||||||||||||
Sbjct: 1308 ttcaatagatggaaaagttcgcatctgg 1335
Score = 71.9 bits (36), Expect = 5e-12
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 60 ctctttatatgggacaagaagttgcagcccatgaaggttcaattttgactatgaaattca 119
||||||||| ||||| ||| || ||| ||||| || ||||| ||||||||||||||||
Sbjct: 788 ctctttatagtggacaggaatttctagcacatgacggatcaatattgactatgaaattca 847
Query: 120 gtcctgatggccagtaccttgcaagtgcaggtgaagatggaatagtgcgtgtttggcagg 179
|||||||||| || ||| | ||||||| |||||||| | | |||||||| ||| |||
Sbjct: 848 gtcctgatggtcaatacttggcaagtggcggtgaagacagtgttgtgcgtgtgtggaagg 907
Query: 180 tgattgag 187
||||||||
Sbjct: 908 tgattgag 915
>28197.m000034 WD-repeat protein, putative
Length = 2145
Score = 85.7 bits (43), Expect = 4e-16
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 47 aaggaactttcagctctttatatgggacaagaagttgcagcccatgaaggttcaattttg 106
|||||||||||||||||||||| ||| ||||| | ||||||||||| |||||| |
Sbjct: 739 aaggaactttcagctctttataaggggcaagatatccaggcccatgaagggtcaattcgg 798
Query: 107 actatgaaattcagtcctgatggccagtaccttgcaagtgcaggtgaagat 157
|| |||||||| ||||||||||| ||||||||||| ||||| || ||||||
Sbjct: 799 acaatgaaatttagtcctgatgggcagtaccttgctagtgctggagaagat 849
Score = 69.9 bits (35), Expect = 2e-11
Identities = 134/167 (80%)
Strand = Plus / Plus
Query: 511 agtcttttcccacaataactatgttacatgtgttcagtttaatcccatggatgatgattc 570
||||||||| || | ||| ||||| || |||||||||||||| || |||| || |||
Sbjct: 1203 agtcttttcacatagtaattatgtgacctgtgttcagtttaaccctgtggacaataatta 1262
Query: 571 attcatcagcggttccatagatgggaaagttcgcatctggacaattcctggttgtcaagt 630
||||| || |||||||||||||| |||||||| || ||| ||||||| |||| |||||
Sbjct: 1263 cttcatgagtggttccatagatggcaaagttcgaatttgggcaattccctgttgccaagt 1322
Query: 631 tattgactggattgatataaccgaaattgttactgcagtttgttatc 677
| |||| |||| ||||| | ||||| ||||| ||||| |||||||
Sbjct: 1323 tgttgattggaccgatattaaagaaatagttacagcagtgtgttatc 1369