Jatropha Genome Database

JcCB0574131.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0574131.10 - phase: 2 /partial
         (397 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007163 Transcription factor HBP-1b(c1), putative               260   6e-69

>30131.m007163 Transcription factor HBP-1b(c1), putative
          Length = 1392

 Score =  260 bits (131), Expect = 6e-69
 Identities = 317/379 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggcatagaaggaagcgcaatccattcatatcgtgtctgtgattttgggacatttaagcg 60
           ||||||||| |||||| |||||||||||||||| || | |||||||||  | ||| | | 
Sbjct: 81  tggcatagagggaagcacaatccattcatatcgagtttctgattttggcgcttttgatca 140

                                                                       
Query: 61  ctctgttgcatttcacttagaggatgctgttgaactgagttcaaatacagtgttcaatcc 120
            || ||||||||||   |||||||||||||||| |||||  ||||||| ||||||||| |
Sbjct: 141 atcagttgcatttcggctagaggatgctgttgatctgagcacaaataccgtgttcaattc 200

                                                                       
Query: 121 agtaaaagttagtagccaagcagtctcttctgatcccctccatattggccctttcaataa 180
           ||  ||||  | || |||||||| | ||||||| ||||||||||||||| ||||  ||||
Sbjct: 201 agctaaagcaaataaccaagcagacacttctgaccccctccatattggctcttttgataa 260

                                                                       
Query: 181 gtcaaatacttcttttaatatcaatccatctgctgctcaagtggaatctcagagattgtc 240
           || || | |||| |||||||| ||||||||| |||| ||| ||||||| ||||||||| |
Sbjct: 261 gttaactgcttcctttaatattaatccatctcctgcccaactggaatcccagagattgcc 320

                                                                       
Query: 241 attagaaaagaatcaacaattgaacctggtttctatatctggtggtaatacagagaactg 300
           ||||||||||  |||||| |||||| |  || || ||||| |||||||||| ||||| ||
Sbjct: 321 attagaaaagggtcaacagttgaacatcattgctttatctagtggtaatactgagaattg 380

                                                                       
Query: 301 gggagagtccaacatggctgatgccagtcctaggactgatatctcaacagatgccgatac 360
           || ||||||||||||||||||||  ||||||||||||||| | ||||||||||  || ||
Sbjct: 381 ggaagagtccaacatggctgatggaagtcctaggactgatttgtcaacagatggagacac 440

                              
Query: 361 tgatgataaaaatcagagg 379
           |||||||||||||||||||
Sbjct: 441 tgatgataaaaatcagagg 459