Jatropha Genome Database
- JcCB0573681.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0573681.10 - phase: 1 /partial
(548 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006475 conserved hypothetical protein 494 e-139
28007.m000182 conserved hypothetical protein 56 2e-07
>30169.m006475 conserved hypothetical protein
Length = 4017
Score = 494 bits (249), Expect = e-139
Identities = 464/535 (86%), Gaps = 3/535 (0%)
Strand = Plus / Plus
Query: 1 agagacttgtagctttcctcactaagcaagtagaggagaagaacaatcagcatggatcgt 60
|||||||||||||| | ||||||||||||||||||||||||| | || | |||||| |
Sbjct: 3473 agagacttgtagctgttctcactaagcaagtagaggagaagacgagtctgtctggatcat 3532
Query: 61 ctgatagactgggaaacttggcaaatgatcttagacaagctcgcatgcgtcttgggacaa 120
|||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 3533 ctgatagatcgggaaacttggcaaatgatctaagacaagctcgcatgcgtctttccacaa 3592
Query: 121 ttgaagaagaagccagaaaggatatccctctgaatatgtacctcattttgggagttgaac 180
||||||||| |||||||||||| || |||||| ||||||||| ||||||||||||||||
Sbjct: 3593 ttgaagaagcagccagaaaggagattcctctggatatgtaccgaattttgggagttgaac 3652
Query: 181 cttctgcttcaacatctgaaattaagaaggcgtatcggaaagctgcacttaggcaccatc 240
||||||||||| |||| || |||||||| || |||||||| |||||||||||||| ||||
Sbjct: 3653 cttctgcttcagcatcggatattaagaaagcatatcggaaggctgcacttaggcatcatc 3712
Query: 241 ctgacaaggctggtcagtccttggcgaggagtgagaatgtagatgatgggctctggaagg 300
||||||||||||||||||||||||| || | ||| |||| ||||||| |||| ||||||
Sbjct: 3713 ctgacaaggctggtcagtccttggcaagaattgaaaatggagatgattggcttcggaagg 3772
Query: 301 agataggagaagaaattcacaagcacgcagacagactctttaaaatgatcggggaggcat 360
|||||||||||||||| |||| ||| || ||| |||| ||||||||||| ||||| ||||
Sbjct: 3773 agataggagaagaaatccacatgcatgctgaccgactttttaaaatgattggggaagcat 3832
Query: 361 atgcagtactttcggaccctaccaagcgctcacagtatgatcttgaagaagaaatgagga 420
||||||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 3833 atgcagtactttcggaccccaccaagcgttcacagtatgatctggaagaagagatgagga 3892
Query: 421 ctgctcaaaagaaacacaatgtaagcggtgcatacagaacatacacagatacccagaact 480
||| |||||||||||||||| |||| | ||| || |||||||| ||| | |||| ||
Sbjct: 3893 atgcccaaaagaaacacaatggaagcagcacatctaggacatacactgatgctcagagct 3952
Query: 481 atcaatttgatagaagtggtggccctaggagacaatggagagaggtttggagatc 535
|||| || || |||||||| | |||| |||||||||||| ||||||||||||
Sbjct: 3953 atcagttcgaaagaagtggcag---taggggacaatggagaggggtttggagatc 4004
>28007.m000182 conserved hypothetical protein
Length = 4470
Score = 56.0 bits (28), Expect = 2e-07
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 159 tacctcattttgggagttgaaccttctgcttcaacatctgaaattaagaaggcgtatcgg 218
||||| |||||||||||| ||| |||| ||| || |||| ||||| ||||| || ||
Sbjct: 4063 taccttattttgggagttaaacaatctgactcagcagctgatattaaaaaggcataccgt 4122
Query: 219 aaagctgcacttaggcaccatcctgacaaggctggtcagt 258
||||| ||||| || || ||||| ||||||||||||||||
Sbjct: 4123 aaagcggcactcagacatcatccagacaaggctggtcagt 4162