Jatropha Genome Database

JcCB0569531.10
Show Alignment: 
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0569531.10 + phase: 1 /pseudo/partial
         (710 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28308.m000064 Leucoanthocyanidin dioxygenase, putative                428   e-119

>28308.m000064 Leucoanthocyanidin dioxygenase, putative
          Length = 1089

 Score =  428 bits (216), Expect = e-119
 Identities = 480/568 (84%)
 Strand = Plus / Plus

                                                                        
Query: 125  cagggaattggtcgatgaatatggttatgaagtggttagacttggcggaaaactgatgag 184
            |||||||||||| | |||||||||   |||||| |||| ||| || || | |||||||||
Sbjct: 507  cagggaattggtagctgaatatggaagtgaagtagttaaactcggtggcagactgatgag 566

                                                                        
Query: 185  ggtattctctgcaaatcttggcttggaagaagaccaccttcaaaatgcttttggcggaga 244
            |||||| ||| |||| || ||| ||||||| ||||  || || ||| ||||||| || ||
Sbjct: 567  ggtattttctacaaacctcggcctggaagaggaccgtctacagaatacttttggtgggga 626

                                                                        
Query: 245  tgaaaacattggtgcttgcctgagggtcaacttctaccccaaatgtccccaaccagacct 304
            ||| || |||||||| ||| |||| || ||||||||||| |||||||||||||| |||||
Sbjct: 627  tgacaatattggtgcatgcttgagagtgaacttctaccctaaatgtccccaacctgacct 686

                                                                        
Query: 305  tacacttggtctctctccacactccgaccccggcgggatgaccattcttttaccggacga 364
            ||| || || || || ||||| || || || ||||| |||||||||||  | ||||| ||
Sbjct: 687  tacgctaggcctttcaccacattctgatcctggcggcatgaccattctcctcccggatga 746

                                                                        
Query: 365  aaatgtttcaggactacaagttcgtcggggcgacaactgggttactgttaatcccgcccc 424
            ||||||  | |||||||| || ||||| |||||||| ||| |||||||||| |||| |||
Sbjct: 747  aaatgtcgctggactacaggtccgtcgaggcgacaattggattactgttaaacccgtccc 806

                                                                        
Query: 425  aaatgccttcattatcaacattggagatcaaattcaggttttgagtaatgcaatttacaa 484
            ||||||||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||
Sbjct: 807  aaatgccttcattatcaacataggagatcaaattcaggttctgagcaatgccatttacaa 866

                                                                        
Query: 485  gagtgtggagcatcgtgtaatagtgaactccaataaagatagagtctctcttgccttctt 544
            |||||| ||||| |||||||| ||||| ||  |||||||||||||||| |||||||| ||
Sbjct: 867  gagtgtagagcaccgtgtaatcgtgaattctgataaagatagagtctcacttgccttttt 926

                                                                        
Query: 545  ctacaaccctaagagtgatttgcttattgaaccatcaaaggaattggtgacaaaggatag 604
            |||||||||| | ||||| ||||| |||||||| |  |||||| | ||||||| ||| ||
Sbjct: 927  ctacaaccctgaaagtgacttgctgattgaaccttgtaaggaacttgtgacaatggaaag 986

                                                                        
Query: 605  gccagctctctatcgaccaatgacatatgacgagtatagactgtacattaggacaaaagg 664
            |||||||||||||| | ||| ||||| ||| ||||| ||||| |||||||||||||| ||
Sbjct: 987  gccagctctctatccagcaaagacatttgatgagtacagactttacattaggacaaaggg 1046

                                        
Query: 665  tccttgtgggaaacaacaagttgaatct 692
            ||||||||| ||||||||||||||||||
Sbjct: 1047 tccttgtggaaaacaacaagttgaatct 1074