Jatropha Genome Database

JcCB0569231.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0569231.10 - phase: 0 /partial/short
         (126 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29866.m000624 transcription initiation factor ia, putative             50   3e-06

>29866.m000624 transcription initiation factor ia, putative
          Length = 1923

 Score = 50.1 bits (25), Expect = 3e-06
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 8    tgttctatgcctgttcactagatcctgaaaactgtgg 44
            |||||||||||||| |||| ||||||||||| |||||
Sbjct: 1052 tgttctatgcctgtgcactcgatcctgaaaattgtgg 1088